Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30757
(511 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 35 0.030
AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical ... 30 1.1
U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical pr... 29 1.5
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 29 1.5
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF039720-7|AAB96695.1| 131|Caenorhabditis elegans Hypothetical ... 29 2.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 3.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 3.4
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 28 4.5
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 28 4.5
AF043693-1|AAB97536.1| 131|Caenorhabditis elegans Hypothetical ... 27 6.0
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 7.9
Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical pr... 27 7.9
U42839-6|ABD63236.1| 88|Caenorhabditis elegans Hypothetical pr... 27 7.9
U42839-5|AAM54196.1| 133|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 7.9
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical protein
T10E10.4 protein.
Length = 966
Score = 35.1 bits (77), Expect = 0.030
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Frame = -1
Query: 442 PRDKFTSLSIQNVFSVFGCPPGVSTDTDLTCTPGFSSSDRV*GRT*ADSLCFWKTSSM*A 263
PR +S+Q GCPPG + + C SS + A S+C S
Sbjct: 608 PRCPSGLMSVQRCAMGIGCPPGNQCENGVCCPMPMCSSGSI-----ASSVCGMANSCPIG 662
Query: 262 --CQRRR--MDRASLWPH--QXSHQIVQGI-CVPGRACYAVKLCPLLCIEPYSSLXSGE- 107
C+ R ++ L P+ + S + +G C PG C + C LL +EP S
Sbjct: 663 YICEGRGCCLEPLPLCPNGGRASMRCYRGAECPPGYGCTPLGGCCLLSMEPVCPTRSNAV 722
Query: 106 -RALDSNMLPS-VSMSRGRVCPFG 41
+ +N+ PS S + G C G
Sbjct: 723 CQCSPNNVCPSGASCTMGTCCSSG 746
>AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical
protein Y51H4A.1 protein.
Length = 214
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +3
Query: 279 VFQKHKESAYVRPYTRSELENPGVQVRSVSVETPGGQPNTLNTFWMLSDVNLSRGLXFSD 458
V + H E+A V Y E++ +V + +TP G P + ++ + S++ + + FS
Sbjct: 70 VIELHTEAAPVENYLEEEIQIKVPEVEEDTEKTPAGSPKSTSS-CISSEILSEQSIEFSS 128
Query: 459 NGARVRSLSLHLQLQAF 509
R S L ++
Sbjct: 129 ISPRPSSFPLDFATSSY 145
>U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical
protein W03B1.6 protein.
Length = 348
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 359 PHLHARVLELRSSVRXHVGRFLVLLENVIDVGVPA*KN 246
PH HAR ++ +R + +L VG PA KN
Sbjct: 165 PHCHARFIDYEQRIRSEKPDYAFVLARYFSVGSPAPKN 202
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 383 RTTEHAEHVLDAQRRELVARTRLLRQRGPCTLAFTSPSTTGIQ 511
R+ +HA+ L + REL A +L R P A P T Q
Sbjct: 198 RSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQ 240
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 383 RTTEHAEHVLDAQRRELVARTRLLRQRGPCTLAFTSPSTTGIQ 511
R+ +HA+ L + REL A +L R P A P T Q
Sbjct: 205 RSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQ 247
>AF039720-7|AAB96695.1| 131|Caenorhabditis elegans Hypothetical
protein F33D11.1 protein.
Length = 131
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 177 VHATR*NCARCCVSNRTVLCXPARGRWTPTCCRAYRCQE 61
+ TR C C +T LC W PTC + CQ+
Sbjct: 58 IKTTRPICKGCGEFIKTNLCEALNSTWHPTCFQCSVCQK 96
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 94 SPAPSRRXTENCTVRYTTTGTVSPRSMHDPEHRYLEQFGXXADEATTMRDP 246
SP PS + E TTT S H+ EH L + E T+ +P
Sbjct: 5815 SPVPSEKSVERVIETTTTTTVTSEHFEHEDEHAQLHD--TVSSEKTSSSEP 5863
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 100 APSRRXTENCTVRYTTTGTVSPRSMHDPEH 189
+PS EN TTT TV+ +PEH
Sbjct: 2901 SPSSHSQENLVTETTTTTTVTSEYYDEPEH 2930
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 94 SPAPSRRXTENCTVRYTTTGTVSPRSMHDPEHRYLEQFGXXADEATTMRDP 246
SP PS + E TTT S H+ EH L + E T+ +P
Sbjct: 5815 SPVPSEKSVERVIETTTTTTVTSEHFEHEDEHAQLHD--TVSSEKTSSSEP 5863
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 100 APSRRXTENCTVRYTTTGTVSPRSMHDPEH 189
+PS EN TTT TV+ +PEH
Sbjct: 2901 SPSSHSQENLVTETTTTTTVTSEYYDEPEH 2930
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -2
Query: 186 FRVVHATR*NCARCCVSNRTVLCXP-ARGRWTPTCCRAYRCQE 61
FR V T +C N C P ARGRW CR RC E
Sbjct: 151 FRRVFVTHKQQYKCI--NELEQCVPDARGRWKCRKCRTDRCFE 191
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 369 PTRTSLARPGSRAQIECKXARRQIPCASG-KRHRCRRASVEEWIAHRCGLISXXTKLFKV 193
P R L RP + C ++ +S RHR + A + + C +
Sbjct: 2 PYRAELKRPDLKGSFPCSICQKVFCHSSSLSRHRMQ-AHFKSYTCTTCNNEIPSNDTLRS 60
Query: 192 SVFRVVHATR*NCARCC 142
++RV + TR RCC
Sbjct: 61 HMYRVHNITRMFMCRCC 77
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = -2
Query: 369 PTRTSLARPGSRAQIECKXARRQIPCASG-KRHRCRRASVEEWIAHRCGLISXXTKLFKV 193
P R L RP + C ++ +S RHR + A + + C +
Sbjct: 2 PYRAELKRPDLKGSFPCSICQKVFCHSSSLSRHRMQ-AHFKSYTCTTCNNEIPSNDTLRS 60
Query: 192 SVFRVVHATR*NCARCC 142
++RV + TR RCC
Sbjct: 61 HMYRVHNITRMFMCRCC 77
>AF043693-1|AAB97536.1| 131|Caenorhabditis elegans Hypothetical
protein C34B2.4 protein.
Length = 131
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -2
Query: 177 VHATR*NCARCCVSNRTVLCXPARGRWTPTCCRAYRCQE 61
+ TR C C +T C W PTC + CQ+
Sbjct: 58 IKTTRPICKGCGEFIKTNFCEALNSTWHPTCFQCSVCQK 96
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 368 GGDARRTTEHAEHVLDAQRRELVARTRLLRQRGPCTLAFTSPS 496
GG A+ +T+ +V + RR R RLL++ P T PS
Sbjct: 1389 GGSAQGSTKSTTYVPETGRRIATGRQRLLKRGSPMATG-TQPS 1430
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 368 GGDARRTTEHAEHVLDAQRRELVARTRLLRQRGPCTLAFTSPS 496
GG A+ +T+ +V + RR R RLL++ P T PS
Sbjct: 1389 GGSAQGSTKSTTYVPETGRRIATGRQRLLKRGSPMATG-TQPS 1430
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 299 FLVLLENVIDVGVPA*KNGSRIVVASSAIXPNCSRYLCS 183
F +L + V+D G P +NG I VA + + C L S
Sbjct: 714 FYLLRDKVVD-GTPCDRNGDDICVAGACMPAGCDHQLHS 751
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 299 FLVLLENVIDVGVPA*KNGSRIVVASSAIXPNCSRYLCS 183
F +L + V+D G P +NG I VA + + C L S
Sbjct: 714 FYLLRDKVVD-GTPCDRNGDDICVAGACMPAGCDHQLHS 751
>Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical
protein F40F8.8 protein.
Length = 442
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 18 IATGTVRLPNGQTRPLDIDTLGNMLESSA-LSPEXR 122
+AT R+PN P+D D N +E +SPE R
Sbjct: 304 VATIPYRIPNAPPPPVDYDFCSNHVEGGKYVSPEFR 339
>U42839-6|ABD63236.1| 88|Caenorhabditis elegans Hypothetical
protein F11C7.6b protein.
Length = 88
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 159 NCARCCVSNRTVLCXPARGRWTPTC 85
NC C NRT C P G P C
Sbjct: 2 NCGYCGKQNRTRTCEPVAGCAEPIC 26
>U42839-5|AAM54196.1| 133|Caenorhabditis elegans Hypothetical
protein F11C7.6a protein.
Length = 133
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 159 NCARCCVSNRTVLCXPARGRWTPTC 85
NC C NRT C P G P C
Sbjct: 47 NCGYCGKQNRTRTCEPVAGCAEPIC 71
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 186 FRVVHATR*NCARCCVSNRTVLCXPARG-RWTPTCCRAYRCQEA 58
FR H + +C +SN C P +G RW CR +C EA
Sbjct: 55 FRRAHFSLVTERKCRLSNGR--CVPTKGGRWFCKKCRLAKCSEA 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,901,913
Number of Sequences: 27780
Number of extensions: 249892
Number of successful extensions: 821
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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