Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30757
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...   100   2e-23
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.34 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.34 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   4.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.8  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   9.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.8  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 99.5 bits (237), Expect = 2e-23
 Identities = 63/160 (39%), Positives = 90/160 (56%), Gaps = 6/160 (3%)
 Frame = +3

Query: 6   VEEAIATGTVRLPNGQ----TRPLDIDTLGNMLESSALSPEXRELYGSIHNNGHSFTA*H 173
           + EAI TG+V    G+    T    ID LGN++E+S LSP  + +YG +HN GH   +  
Sbjct: 317 IYEAIHTGSVINTRGERIQLTEKNGIDVLGNIMEASILSPN-QNVYGDLHNFGHVAISYI 375

Query: 174 ARPGTQIP*T--IWXDX**GHNDARSILLRWHAYIDDVFQKHKESAYVRPYTRSELENPG 347
             P  +   +  +  D      D   I  RWHA++DDVFQ+HK +  +  YT  +L+ PG
Sbjct: 376 HDPDHRYLESFGVMGDSATAMRDP--IFYRWHAFVDDVFQEHKNT--LPQYTVQQLDFPG 431

Query: 348 VQVRSVSVETPGGQPNTLNTFWMLSDVNLSRGLXFSDNGA 467
           +++  + + T   Q N LNTFW  SDV+LSRGL F+  GA
Sbjct: 432 IEIADIKLTT-NQQRNILNTFWTKSDVDLSRGLDFTPRGA 470



 Score = 51.2 bits (117), Expect = 6e-09
 Identities = 21/35 (60%), Positives = 24/35 (68%)
 Frame = +1

Query: 151 GTVSPRSMHDPEHRYLEQFGXXADEATTMRDPFFY 255
           G V+   +HDP+HRYLE FG   D AT MRDP FY
Sbjct: 368 GHVAISYIHDPDHRYLESFGVMGDSATAMRDPIFY 402


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +3

Query: 318 YTRSELENPGVQVRSVSVE 374
           Y++SEL+ PGV+  SV+++
Sbjct: 441 YSQSELQMPGVKFESVNID 459



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 ATTMRDPFFY 255
           +T+MRDP FY
Sbjct: 412 STSMRDPAFY 421


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 9/19 (47%), Positives = 16/19 (84%)
 Frame = +3

Query: 318 YTRSELENPGVQVRSVSVE 374
           Y++SEL+ PGV+  SV+++
Sbjct: 441 YSQSELQMPGVKFESVNID 459



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 ATTMRDPFFY 255
           +T+MRDP FY
Sbjct: 412 STSMRDPAFY 421


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 384  RRASPPTRTSLARPGSR 334
            R  SPPT  S++R GSR
Sbjct: 1393 RLTSPPTPLSISRAGSR 1409


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 371 GDARRTTEHAEHVLDAQRRELVARTRLLRQRGPC---TLAFTSP 493
           GD R   E +E      R+EL ++T  +  +G     TL F  P
Sbjct: 478 GDGRNNKEDSEEFRQRLRKELDSKTGGVNLKGHAHWLTLHFKDP 521


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 118 TENCTVRYTTTGTVSPRSMHDPEHRYL 198
           T N T R  TTG     ++ +  +RYL
Sbjct: 537 TVNLTSRTETTGEPGKINVSEDAYRYL 563


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 158 TVPVVVYRTVQFSVFRREGAGLQHVAERIDVKRPSLPV 45
           +VP VVY    + + + E   ++   E +D   P LP+
Sbjct: 20  SVPKVVYDGPIYELRQIEEENIEPDTELMDSNEPLLPL 57


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 118 TENCTVRYTTTGTVSPRSMHDPEHRYL 198
           T N T R  TTG     ++ +  +RYL
Sbjct: 537 TVNLTSRTETTGEPGKINVSEDAYRYL 563


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,285
Number of Sequences: 438
Number of extensions: 2861
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)