Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30756
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 138 1e-32
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 138 1e-32
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 138 1e-32
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 138 1e-32
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 67 4e-11
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 2e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 9e-06
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 31 3.3
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 31 3.3
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 31 3.3
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 138 bits (333), Expect = 1e-32
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 470 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYGS 291
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGID RVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 290 NKKTRHMLPNGF 255
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 77.4 bits (182), Expect = 3e-14
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = -2
Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAA 94
P RK LVHNVKELE+ M N+ YCAEIAH VSSK RK IVERA QL+I RVTN A
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAI-RVTNPNA 127
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 138 bits (333), Expect = 1e-32
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 470 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYGS 291
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGID RVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 290 NKKTRHMLPNGF 255
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 77.4 bits (182), Expect = 3e-14
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = -2
Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAA 94
P RK LVHNVKELE+ M N+ YCAEIAH VSSK RK IVERA QL+I RVTN A
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAI-RVTNPNA 127
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 138 bits (333), Expect = 1e-32
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 470 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYGS 291
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGID RVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 290 NKKTRHMLPNGF 255
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 77.4 bits (182), Expect = 3e-14
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = -2
Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAA 94
P RK LVHNVKELE+ M N+ YCAEIAH VSSK RK IVERA QL+I RVTN A
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAI-RVTNPNA 127
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 138 bits (333), Expect = 1e-32
Identities = 60/72 (83%), Positives = 67/72 (93%)
Frame = -3
Query: 470 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYGS 291
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGID RVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 290 NKKTRHMLPNGF 255
NKKT+HMLP+GF
Sbjct: 63 NKKTKHMLPSGF 74
Score = 77.4 bits (182), Expect = 3e-14
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = -2
Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAA 94
P RK LVHNVKELE+ M N+ YCAEIAH VSSK RK IVERA QL+I RVTN A
Sbjct: 71 PSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAI-RVTNPNA 127
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 66.9 bits (156), Expect = 4e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = -2
Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAAS 91
P K LVHNVKELE+ + N+ YC EI H VSSK K I+ERA Q+ + RVTNA AS
Sbjct: 43 PSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILERAAQV-VIRVTNANAS 100
Score = 42.7 bits (96), Expect = 8e-04
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -3
Query: 314 MPNIGYGSNKKTRHMLPNGF 255
MPNIGYG NKKT+H+LP+GF
Sbjct: 27 MPNIGYGRNKKTKHILPSGF 46
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 2e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = -3
Query: 470 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 378
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 9e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -3
Query: 470 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 381
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 383 KRNWRKPRGIDXRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 261
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 383 KRNWRKPRGIDXRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 261
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 383 KRNWRKPRGIDXRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 261
KR++ + G+D +++R LMP+ G ++ +TRHM P+
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,169,133
Number of Sequences: 237096
Number of extensions: 1320772
Number of successful extensions: 3594
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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