Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30756
         (532 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   142   4e-34
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   142   4e-34
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   138   3e-33
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   138   3e-33
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   138   3e-33
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   138   3e-33
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   138   3e-33
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   135   4e-32
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    34   0.14 
X98094-4|CAA66723.1|  758|Drosophila melanogaster l(2)dlt protein.     28   6.9  
X83414-1|CAA58441.1|  758|Drosophila melanogaster lethal(2)denti...    28   6.9  
AY121647-1|AAM51974.1|  769|Drosophila melanogaster LD21681p pro...    28   6.9  
AE013599-3670|AAF47049.1|  769|Drosophila melanogaster CG11295-P...    28   6.9  

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  142 bits (343), Expect = 4e-34
 Identities = 62/75 (82%), Positives = 65/75 (86%)
 Frame = -3

Query: 479 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIG 300
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 299 YGSNKKTRHMLPNGF 255
           YGSNK+TRHMLP GF
Sbjct: 72  YGSNKRTRHMLPTGF 86



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 136


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  142 bits (343), Expect = 4e-34
 Identities = 62/75 (82%), Positives = 65/75 (86%)
 Frame = -3

Query: 479 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIG 300
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 299 YGSNKKTRHMLPNGF 255
           YGSNK+TRHMLP GF
Sbjct: 72  YGSNKRTRHMLPTGF 86



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 83  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 136


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/73 (83%), Positives = 63/73 (86%)
 Frame = -3

Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 293 SNKKTRHMLPNGF 255
           SNK+TRHMLP GF
Sbjct: 61  SNKRTRHMLPTGF 73



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 123


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/73 (83%), Positives = 63/73 (86%)
 Frame = -3

Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 293 SNKKTRHMLPNGF 255
           SNK+TRHMLP GF
Sbjct: 61  SNKRTRHMLPTGF 73



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 123


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/73 (83%), Positives = 63/73 (86%)
 Frame = -3

Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 293 SNKKTRHMLPNGF 255
           SNK+TRHMLP GF
Sbjct: 61  SNKRTRHMLPTGF 73



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 123


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/73 (83%), Positives = 63/73 (86%)
 Frame = -3

Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 293 SNKKTRHMLPNGF 255
           SNK+TRHMLP GF
Sbjct: 61  SNKRTRHMLPTGF 73



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 123


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  138 bits (335), Expect = 3e-33
 Identities = 61/73 (83%), Positives = 63/73 (86%)
 Frame = -3

Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 293 SNKKTRHMLPNGF 255
           SNK+TRHMLP GF
Sbjct: 61  SNKRTRHMLPTGF 73



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTN 103
           P   +K LVHNV+ELE+  MQNR YC EIAHGVSSKKRK IVERA+QLS+ R+TN
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSV-RLTN 123


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  135 bits (326), Expect = 4e-32
 Identities = 60/73 (82%), Positives = 62/73 (84%)
 Frame = -3

Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GID RV RRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60

Query: 293 SNKKTRHMLPNGF 255
           SNK+TRHMLP GF
Sbjct: 61  SNKRTRHMLPTGF 73



 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 25/58 (43%), Positives = 34/58 (58%)
 Frame = -2

Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAA 94
           P   +K LVHNV+ELE+  MQN +   E+    S  + K I+ERA+QLS+   T   A
Sbjct: 70  PTGFKKFLVHNVRELEVLLMQNPRLLREMP-TASPPRSKEIIERAKQLSLRSPTPTVA 126


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -2

Query: 357 Y*XQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIRKV 247
           Y  QS   +QG++ DAQH LR +Q  P +A   I++V
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEV 43



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 247 PSSQC*RAGNXXDAKQEVLRRDRSWCLFEEAEAD 146
           P +Q  RAG    A+  +LRRDR   L +EA+ D
Sbjct: 44  PGAQRARAGGPAHAEPRLLRRDRPRRLLQEAQGD 77


>X98094-4|CAA66723.1|  758|Drosophila melanogaster l(2)dlt protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 163 EEAEADRGKSPAAQHLQSDECG-RIASAPRR 74
           EE +AD   SP  Q L+  EC  RI ++PRR
Sbjct: 635 EEQQADVLASPRLQSLRQSECSPRIHASPRR 665


>X83414-1|CAA58441.1|  758|Drosophila melanogaster
           lethal(2)denticleless protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 163 EEAEADRGKSPAAQHLQSDECG-RIASAPRR 74
           EE +AD   SP  Q L+  EC  RI ++PRR
Sbjct: 635 EEQQADVLASPRLQSLRQSECSPRIHASPRR 665


>AY121647-1|AAM51974.1|  769|Drosophila melanogaster LD21681p
           protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 163 EEAEADRGKSPAAQHLQSDECG-RIASAPRR 74
           EE +AD   SP  Q L+  EC  RI ++PRR
Sbjct: 646 EEQQADVLASPRLQSLRQSECSPRIHASPRR 676


>AE013599-3670|AAF47049.1|  769|Drosophila melanogaster CG11295-PA
           protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 163 EEAEADRGKSPAAQHLQSDECG-RIASAPRR 74
           EE +AD   SP  Q L+  EC  RI ++PRR
Sbjct: 646 EEQQADVLASPRLQSLRQSECSPRIHASPRR 676


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,402,519
Number of Sequences: 53049
Number of extensions: 416336
Number of successful extensions: 1138
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)