Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30756
(532 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 153 8e-40
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 5.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 5.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 5.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 5.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 5.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 5.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 5.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 5.9
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 7.9
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 153 bits (372), Expect = 8e-40
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = -3
Query: 473 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDXRVRRRFKGQYLMPNIGYG 294
MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP+GID RVRRRFKGQYLMPNIGYG
Sbjct: 1 MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 293 SNKKTRHMLPNGF 255
SNKKTRHMLP GF
Sbjct: 61 SNKKTRHMLPTGF 73
Score = 88.6 bits (210), Expect = 3e-20
Identities = 46/58 (79%), Positives = 49/58 (84%)
Frame = -2
Query: 267 PKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKLIVERAQQLSICRVTNAAA 94
P RKVLVHNVKELE+ MQNRK+CAEIAHG SSKKRK IVERAQQLSI RVT A+A
Sbjct: 70 PTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSI-RVTYASA 126
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 101 AFVTLQMLSCWALSTISFRFFEETP 175
AFV + + WA S RF P
Sbjct: 1015 AFVFRESVGAWAYSKYGLRFLRAKP 1039
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 205 KQEVLRRDRSWCLFEEAEAD 146
++E LRR R W + +E E +
Sbjct: 32 QEERLRRRREWMIQQERERE 51
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = -2
Query: 303 WLRFQQEDPSYAPKWIRKVLVHNVKELEIXXMQNRKYCAEIAHGVSSKKRKL 148
W+R Q E + R + KE R+ EIAH + +R++
Sbjct: 263 WMRSQFERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQI 314
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,962
Number of Sequences: 438
Number of extensions: 2486
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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