Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30754
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81533-2|CAB04342.1|  432|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z70270-7|CAH04652.1|  175|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>Z81533-2|CAB04342.1|  432|Caenorhabditis elegans Hypothetical
           protein F36G9.3 protein.
          Length = 432

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 19/80 (23%), Positives = 40/80 (50%)
 Frame = +1

Query: 235 LLFALSFAQVAILMLLGYILQYMACFRRDRGFCYKLVPLALTSSLEYDTYKEVCYGNVAF 414
           LL+++ F  +AIL    + +     +++++  CYK +   +TS+      +++ +  V F
Sbjct: 173 LLYSM-FTILAILSAFVFSMLREPVYKKEKSGCYKKL---MTSTFRLLFTRKMLFLIVIF 228

Query: 415 IYIGPSVLHFLGFYMHCIYF 474
            Y+G     + G Y  C+ F
Sbjct: 229 SYVGIEQSFWTGIYPTCVSF 248


>Z70270-7|CAH04652.1|  175|Caenorhabditis elegans Hypothetical
           protein C53D6.10 protein.
          Length = 175

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +1

Query: 4   NDKCSEPAMERSTRSSLDANSVDIGEITESPDAEYMSNXSAILHYCKSKILIPYLKLLTI 183
           N K SE   +   + +    S D  ++  S +    +N  + L YC+  ILI  L ++ +
Sbjct: 91  NGKSSETKTKNKVKKNKSKASADESQMG-SAEERLSTNRPSTLDYCQVAILITLLVIICL 149

Query: 184 MGLRPVMDVS 213
           + + PV+ +S
Sbjct: 150 VSI-PVLLIS 158


>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -1

Query: 125 AEXLLMYSASGDSVISPISTLLASRLDLVDLSIAGSEHLSF 3
           AE   +   +GD  + PI   L+   D  DL IA SEH+SF
Sbjct: 581 AEQDYLSRGNGDITLQPIEDELS---DDEDLMIANSEHMSF 618


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,683,288
Number of Sequences: 27780
Number of extensions: 229307
Number of successful extensions: 563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)