Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30753
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 70 1e-12
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 70 1e-12
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 70 1e-12
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 58 3e-09
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 58 3e-09
AF003390-2|AAP31432.1| 341|Caenorhabditis elegans Hypothetical ... 29 1.3
AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical ... 29 1.3
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 27 5.3
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 27 5.3
Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical pr... 27 7.0
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 27 7.0
U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily ass... 27 9.2
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 69.7 bits (163), Expect = 1e-12
Identities = 41/119 (34%), Positives = 56/119 (47%)
Frame = +1
Query: 118 FILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWGENPTTRISSHPRTS 297
FILPT+IPVYFW E+ AF+ A FRY F + TW +NSAAH +G P S P +
Sbjct: 204 FILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDS-SITPVEN 262
Query: 298 PCRCLHSARDSXXXXXXXXXXXRQRNSVTTD*TSPPNFINFFAKIGWAYDLKTVSDEII 474
+ + + + + + I+ A +G YD KT DEII
Sbjct: 263 VFTTIAAVGEGGHNFHHTFPQDYRTSEYSLKYNWTRVLIDTAAALGLVYDRKTACDEII 321
Score = 57.2 bits (132), Expect = 6e-09
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 252 GGKPYDKNIKPSENISVSVFALXEGFHNYHHTXPWDYKTAE 374
G KPYD +I P EN+ ++ A+ EG HN+HHT P DY+T+E
Sbjct: 249 GWKPYDSSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSE 289
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +2
Query: 2 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILM 103
KHP++K +G LD+SDL +DP+L FQ+K+Y L+
Sbjct: 166 KHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLV 199
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 69.7 bits (163), Expect = 1e-12
Identities = 41/119 (34%), Positives = 56/119 (47%)
Frame = +1
Query: 118 FILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWGENPTTRISSHPRTS 297
FILPT+IPVYFW E+ AF+ A FRY F + TW +NSAAH +G P S P +
Sbjct: 204 FILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDS-SITPVEN 262
Query: 298 PCRCLHSARDSXXXXXXXXXXXRQRNSVTTD*TSPPNFINFFAKIGWAYDLKTVSDEII 474
+ + + + + + I+ A +G YD KT DEII
Sbjct: 263 VFTTIAAVGEGGHNFHHTFPQDYRTSEYSLKYNWTRVLIDTAAALGLVYDRKTACDEII 321
Score = 57.2 bits (132), Expect = 6e-09
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 252 GGKPYDKNIKPSENISVSVFALXEGFHNYHHTXPWDYKTAE 374
G KPYD +I P EN+ ++ A+ EG HN+HHT P DY+T+E
Sbjct: 249 GWKPYDSSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSE 289
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +2
Query: 2 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILM 103
KHP++K +G LD+SDL +DP+L FQ+K+Y L+
Sbjct: 166 KHPQVKEQGAKLDMSDLLSDPVLVFQRKHYFPLV 199
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 69.7 bits (163), Expect = 1e-12
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 118 FILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWGENP-TTRISSHPRT 294
FILPT+IPVYFW E+ AF+VA FRY F + TW +NSAAH +G P T +S+
Sbjct: 203 FILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVSAVENV 262
Query: 295 SPCRCLHSARDSXXXXXXXXXXXRQRNSVTTD*TSPPNFINFFAKIGWAYDLKTVSDEII 474
S+ + T I+ A +G YD KT++DE I
Sbjct: 263 FTTVVAVGEGGHNFHHTFPQDYRASEYSLIYNWTRV--LIDTAAVLGLVYDRKTIADEFI 320
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 252 GGKPYDKNIKPSENISVSVFALXEGFHNYHHTXPWDYKTAE 374
G KPYD ++ EN+ +V A+ EG HN+HHT P DY+ +E
Sbjct: 248 GWKPYDTSVSAVENVFTTVVAVGEGGHNFHHTFPQDYRASE 288
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 2 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILM 103
KHP++K G LDLSDL++DP+L FQ+K+Y L+
Sbjct: 165 KHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLV 198
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 69.7 bits (163), Expect = 1e-12
Identities = 43/120 (35%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 118 FILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWGENP-TTRISSHPRT 294
FILPT+IPVYFW E+ AF+VA FRY F + TW +NSAAH +G P T +S+
Sbjct: 203 FILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVSAVENV 262
Query: 295 SPCRCLHSARDSXXXXXXXXXXXRQRNSVTTD*TSPPNFINFFAKIGWAYDLKTVSDEII 474
S+ + T I+ A +G YD KT++DE I
Sbjct: 263 FTTVVAVGEGGHNFHHTFPQDYRASEYSLIYNWTRV--LIDTAAVLGLVYDRKTIADEFI 320
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 252 GGKPYDKNIKPSENISVSVFALXEGFHNYHHTXPWDYKTAE 374
G KPYD ++ EN+ +V A+ EG HN+HHT P DY+ +E
Sbjct: 248 GWKPYDTSVSAVENVFTTVVAVGEGGHNFHHTFPQDYRASE 288
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 2 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILM 103
KHP++K G LDLSDL++DP+L FQ+K+Y L+
Sbjct: 165 KHPQVKEHGGKLDLSDLFSDPVLVFQRKHYFPLV 198
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 58.0 bits (134), Expect = 3e-09
Identities = 37/119 (31%), Positives = 51/119 (42%)
Frame = +1
Query: 118 FILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWGENPTTRISSHPRTS 297
F LPT IPV W ES AF+ A LFRY F + TW +NS +H G P +S +
Sbjct: 195 FALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYDHQASSV-DN 253
Query: 298 PCRCLHSARDSXXXXXXXXXXXRQRNSVTTD*TSPPNFINFFAKIGWAYDLKTVSDEII 474
+ + + + + I+F A IG YD KT +E+I
Sbjct: 254 LWTSIAAVGEGGHNYHHTFPQDYRTSEHAEFLNWTRVLIDFGASIGMVYDRKTTPEEVI 312
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 249 MGGKPYDKNIKPSENISVSVFALXEGFHNYHHTXPWDYKTAE 374
+G +PYD +N+ S+ A+ EG HNYHHT P DY+T+E
Sbjct: 239 VGWQPYDHQASSVDNLWTSIAAVGEGGHNYHHTFPQDYRTSE 280
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Frame = +2
Query: 2 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILMPI---AWPSF 124
KH +LK +G LDLSDLY DP+L FQ+K YL L+ I A P+F
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALPTF 200
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 58.0 bits (134), Expect = 3e-09
Identities = 37/119 (31%), Positives = 51/119 (42%)
Frame = +1
Query: 118 FILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWGENPTTRISSHPRTS 297
F LPT IPV W ES AF+ A LFRY F + TW +NS +H G P +S +
Sbjct: 195 FALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYDHQASSV-DN 253
Query: 298 PCRCLHSARDSXXXXXXXXXXXRQRNSVTTD*TSPPNFINFFAKIGWAYDLKTVSDEII 474
+ + + + + I+F A IG YD KT +E+I
Sbjct: 254 LWTSIAAVGEGGHNYHHTFPQDYRTSEHAEFLNWTRVLIDFGASIGMVYDRKTTPEEVI 312
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 249 MGGKPYDKNIKPSENISVSVFALXEGFHNYHHTXPWDYKTAE 374
+G +PYD +N+ S+ A+ EG HNYHHT P DY+T+E
Sbjct: 239 VGWQPYDHQASSVDNLWTSIAAVGEGGHNYHHTFPQDYRTSE 280
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Frame = +2
Query: 2 KHPELKRKGKGLDLSDLYADPILRFQKKYYLILMPI---AWPSF 124
KH +LK +G LDLSDLY DP+L FQ+K YL L+ I A P+F
Sbjct: 157 KHDQLKIQGGKLDLSDLYEDPVLMFQRKNYLPLVGIFCFALPTF 200
>AF003390-2|AAP31432.1| 341|Caenorhabditis elegans Hypothetical
protein R155.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 IPEKVLFNSDA-NRLAFILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAA 243
IP++ FNSDA N L+F FW SW+ +F T+++Y WL+ A
Sbjct: 96 IPDQY-FNSDAYNNLSF---------FWRWSWVTLWFRLTMYKYC----AMWLITEGA 139
>AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical
protein R155.1a protein.
Length = 473
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 IPEKVLFNSDA-NRLAFILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAA 243
IP++ FNSDA N L+F FW SW+ +F T+++Y WL+ A
Sbjct: 228 IPDQY-FNSDAYNNLSF---------FWRWSWVTLWFRLTMYKYC----AMWLITEGA 271
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 456 SFQIVCPSNFSKEIDEIGW*SLICCY 379
+F+ V SNF + +D GW L CY
Sbjct: 1168 TFKCVSQSNFIEHLDRHGWNQLYKCY 1193
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 456 SFQIVCPSNFSKEIDEIGW*SLICCY 379
+F+ V SNF + +D GW L CY
Sbjct: 1168 TFKCVSQSNFIEHLDRHGWNQLYKCY 1193
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 244 HKWGENPTTRISSHPRTSPCRCLHSARDS 330
H++G++ S+ P +PC+ H RDS
Sbjct: 68 HQYGDSTDGCTSAGPHFNPCKMNHGGRDS 96
>Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical
protein F53B7.3 protein.
Length = 267
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 179 KNALIQDSFQKYTGIT---VGKMKAKRLASELNSTFSGIEEWDQHISHLG 39
+ +++D+ +K T I +G+ K + L E+N W+Q I LG
Sbjct: 47 RREIVRDASKKITAIQNPGLGEFKLRDLNDEVNRLIKLKHAWEQRIRELG 96
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 27.1 bits (57), Expect = 7.0
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +1
Query: 76 PEKVLFNSDANRLAFILPTVIPVYFWNESWINAFFVATLFRYTFXXNVTWLVNSAAHKWG 255
PE + ++ NR LP +IP ++ A FVA +T W VN A+
Sbjct: 414 PELLSQSNCLNRRTPYLPPLIPTTGVFVYFVPANFVANQINHTGDGLSPWTVNPAS---- 469
Query: 256 ENPTTRISSHPR 291
E P+ R+ S R
Sbjct: 470 EGPSPRVRSTRR 481
>U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 226 protein.
Length = 560
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 177 LRCDSFPLYIYXECHMASELRCSQMG 254
L+C++F Y+Y H + + QMG
Sbjct: 401 LKCETFVRYVYRHAHPSKAMHFLQMG 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,566,625
Number of Sequences: 27780
Number of extensions: 240489
Number of successful extensions: 595
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -