Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30752
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.5  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   6.5  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   6.5  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   6.5  
EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.        23   8.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.6  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 56  YSSDTKCTHSGKSSTF 9
           Y+S TK TH+ KS T+
Sbjct: 474 YNSKTKSTHTPKSITY 489


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 279 CEHVLQYPGLAKRTTHPSLEP 217
           C H+ +Y     R THP + P
Sbjct: 410 CNHLAEYLEAYWRATHPPVRP 430


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 389 YVDLLTSGELELGT 348
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 389 YVDLLTSGELELGT 348
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>EF989011-1|ABS17666.1|  399|Anopheles gambiae serpin 7 protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 365 ELELGTAQSLDDLCLPPVTRAHGHD 291
           ELE   A  + DL LP  T    HD
Sbjct: 283 ELETSVAPKMVDLWLPKFTIEDSHD 307


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = -2

Query: 188 IDADNVERVKSHADMELILSAVLXTRYLLQQIRP---ASKASELSCSYSSDTK 39
           +  DN  + ++  ++E +   +      L+Q+RP   A +  E  CS   + K
Sbjct: 316 VQGDNKSKERAEQELERLKITIAEKEKELEQVRPRYEAMRRKEEECSRELNLK 368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,859
Number of Sequences: 2352
Number of extensions: 11673
Number of successful extensions: 76
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)