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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30751
         (394 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical pr...   105   1e-23
Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical pr...   105   1e-23
Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical pr...   105   1e-23
X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.       105   1e-23
X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.       105   1e-23
X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.       105   1e-23
X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.       105   1e-23
U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4...   105   1e-23
U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4...   105   1e-23
U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4...   105   1e-23
Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical pr...   104   2e-23
J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein ( C.ele...    95   2e-20
J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein ( C.ele...    95   2e-20
J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein ( C.ele...    95   2e-20
J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein ( C.ele...    95   2e-20
AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical...    62   1e-10
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    53   8e-08
AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 comple...    50   6e-07
Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical pr...    35   0.024
U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related p...    35   0.024
Z49968-1|CAA90258.2|  499|Caenorhabditis elegans Hypothetical pr...    29   1.2  
Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical pr...    27   3.6  

>Z81584-6|CAB04678.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.6 protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>Z81584-5|CAB04675.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.5 protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>Z81584-4|CAB04676.1|  376|Caenorhabditis elegans Hypothetical
           protein T04C12.4 protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>X16799-1|CAA34720.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>X16798-1|CAA34719.1|  375|Caenorhabditis elegans actin protein.
          Length = 375

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>X16797-1|CAA34718.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 93.5 bits (222), Expect = 5e-20
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           ++DNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  ILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>X16796-1|CAA34717.1|  376|Caenorhabditis elegans actin protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>U64601-7|AAK77622.1|  332|Caenorhabditis elegans Actin protein 4,
           isoform b protein.
          Length = 332

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 12  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 56


>U64601-6|AAT92068.1|  362|Caenorhabditis elegans Actin protein 4,
           isoform c protein.
          Length = 362

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 42  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 86



 Score = 75.4 bits (177), Expect = 1e-14
 Identities = 34/35 (97%), Positives = 34/35 (97%)
 Frame = +2

Query: 149 AGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 6   AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 40


>U64601-5|AAB04575.1|  376|Caenorhabditis elegans Actin protein 4,
           isoform a protein.
          Length = 376

 Score =  105 bits (251), Expect = 1e-23
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54


>Z83241-1|CAB05817.1|  375|Caenorhabditis elegans Hypothetical
           protein T25C8.2 protein.
          Length = 375

 Score =  104 bits (250), Expect = 2e-23
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APE
Sbjct: 55  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPE 99



 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 9   VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53


>J01046-1|AAA27890.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene IV, 5' end. ).
          Length = 86

 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54



 Score = 70.9 bits (166), Expect = 3e-13
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01044-1|AAA27889.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene III, 5' end. ).
          Length = 86

 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54



 Score = 70.9 bits (166), Expect = 3e-13
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86


>J01043-1|AAA27888.1|   83|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene II, 5' end. ).
          Length = 83

 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54



 Score = 65.3 bits (152), Expect = 1e-11
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDM 339
           GDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDM 83


>J01042-1|AAA27887.1|   86|Caenorhabditis elegans protein (
           C.elegans (nematode)actin gene I, 5' end. ).
          Length = 86

 Score = 95.1 bits (226), Expect = 2e-20
 Identities = 43/45 (95%), Positives = 43/45 (95%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
           VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10  VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54



 Score = 70.9 bits (166), Expect = 3e-13
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
           GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56  GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86


>AL132949-19|CAB70110.2|  374|Caenorhabditis elegans Hypothetical
           protein Y53F4B.22 protein.
          Length = 374

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 390
           G +A+S RG+ +++YP+EHGIV NW DMEKIW + F  ++L++ PE
Sbjct: 58  GPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPE 103



 Score = 48.0 bits (109), Expect = 2e-06
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVG 232
           V+DNGSG+  AGFAG+  P+  F + VGRP+   VM G
Sbjct: 12  VIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 52.8 bits (121), Expect = 8e-08
 Identities = 21/48 (43%), Positives = 30/48 (62%)
 Frame = +1

Query: 220 RDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
           R G    + L+ G+E    R +L + YP+++GIV NWDDM  +W HTF
Sbjct: 46  RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTF 93



 Score = 43.6 bits (98), Expect = 5e-05
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +2

Query: 110 RVWVVDNGSGMCXAGFAGDDAPRAVFPSIVGRP 208
           +V VVDNG+G    G+AG + P  +FPS+VGRP
Sbjct: 7   KVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39


>AC024200-9|AAF36012.1|  425|Caenorhabditis elegans Arp2/3 complex
           component protein 1 protein.
          Length = 425

 Score = 50.0 bits (114), Expect = 6e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 GDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
           GDEA S      T+KYPI HGIV +WD ME+ W    +  LR  PE
Sbjct: 68  GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 113



 Score = 31.5 bits (68), Expect = 0.22
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIV 199
           V+DNG+G    G+AG+  P+ + PS +
Sbjct: 10  VIDNGTGYTKLGYAGNTEPQFIIPSAI 36


>Z46676-5|CAA86667.3|  418|Caenorhabditis elegans Hypothetical
           protein C08B11.6 protein.
          Length = 418

 Score = 34.7 bits (76), Expect = 0.024
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 259 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
           +E   K  +  ++ PIE G V NWD  ++IW  TF
Sbjct: 49  EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82


>U24189-2|AAC47513.1|  418|Caenorhabditis elegans actin-related
           protein-like protein.
          Length = 418

 Score = 34.7 bits (76), Expect = 0.024
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 259 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
           +E   K  +  ++ PIE G V NWD  ++IW  TF
Sbjct: 49  EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82


>Z49968-1|CAA90258.2|  499|Caenorhabditis elegans Hypothetical
           protein M110.1 protein.
          Length = 499

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 196 RGKAPXSGRDGRYGTEGLL*GDEAQSKRG 282
           RGKA  +GRDGR G EG       Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244


>Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical
           protein C27H2.2a protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -3

Query: 353 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPHKSPSVPYRPSRPD 213
           CQ+FS   QLVT+   SMG +++++    L L AS     P++   P   D
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEID 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,228,641
Number of Sequences: 27780
Number of extensions: 182483
Number of successful extensions: 502
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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