BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30751
(394 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 105 1e-23
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 105 1e-23
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 105 1e-23
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 105 1e-23
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 105 1e-23
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 105 1e-23
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 105 1e-23
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 105 1e-23
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 105 1e-23
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 105 1e-23
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 104 2e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 95 2e-20
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 95 2e-20
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 95 2e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 95 2e-20
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 62 1e-10
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 53 8e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 50 6e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.024
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.024
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 3.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 93.5 bits (222), Expect = 5e-20
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
++DNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 ILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 12 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 56
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 42 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 86
Score = 75.4 bits (177), Expect = 1e-14
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +2
Query: 149 AGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 6 AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 40
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 105 bits (251), Expect = 1e-23
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 104 bits (250), Expect = 2e-23
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APE
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPE 99
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 9 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 3e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 3e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 65.3 bits (152), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDM 339
GDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/45 (95%), Positives = 43/45 (95%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVGMGQKDSY 253
VVDNGSGMC AGFAGDDAPRAVFPSIVGRPR QGVMVGMGQKDSY
Sbjct: 10 VVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 70.9 bits (166), Expect = 3e-13
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 348
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 390
G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PE
Sbjct: 58 GPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPE 103
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIVGRPRXQGVMVG 232
V+DNGSG+ AGFAG+ P+ F + VGRP+ VM G
Sbjct: 12 VIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 52.8 bits (121), Expect = 8e-08
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 220 RDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
R G + L+ G+E R +L + YP+++GIV NWDDM +W HTF
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTF 93
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 110 RVWVVDNGSGMCXAGFAGDDAPRAVFPSIVGRP 208
+V VVDNG+G G+AG + P +FPS+VGRP
Sbjct: 7 KVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 50.0 bits (114), Expect = 6e-07
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 GDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 390
GDEA S T+KYPI HGIV +WD ME+ W + LR PE
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPE 113
Score = 31.5 bits (68), Expect = 0.22
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 119 VVDNGSGMCXAGFAGDDAPRAVFPSIV 199
V+DNG+G G+AG+ P+ + PS +
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 259 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
+E K + ++ PIE G V NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 259 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
+E K + ++ PIE G V NWD ++IW TF
Sbjct: 49 EECSDKFSLFYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 196 RGKAPXSGRDGRYGTEGLL*GDEAQSKRG 282
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -3
Query: 353 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPHKSPSVPYRPSRPD 213
CQ+FS QLVT+ SMG +++++ L L AS P++ P D
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEID 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,228,641
Number of Sequences: 27780
Number of extensions: 182483
Number of successful extensions: 502
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -