Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30744
         (354 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034393-16|CAA22331.2|  286|Caenorhabditis elegans Hypothetical...    27   2.8  
Z46795-2|CAB54311.1|  932|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z46795-1|CAA86788.1|  924|Caenorhabditis elegans Hypothetical pr...    27   3.8  
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U58738-1|AAB00602.1|  290|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    26   6.6  

>AL034393-16|CAA22331.2|  286|Caenorhabditis elegans Hypothetical
           protein Y18D10A.21 protein.
          Length = 286

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 151 KPKKCQLEELKNKFTNDKAINMAKVIFKSQKKDAHYGILCRYY*IF 14
           KP K  ++ L +K   +  +NM   IF+ Q     YG+  ++Y +F
Sbjct: 57  KPTKYVIKCL-SKVKQEVIVNMYSYIFEIQNSRHKYGVFTQFYHVF 101


>Z46795-2|CAB54311.1|  932|Caenorhabditis elegans Hypothetical
           protein T19E10.1b protein.
          Length = 932

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 176 VCVELVLTEKLLIDYLHMIVSFD--YDCEI 259
           VC+E+V TEK  +  L ++V F    +CEI
Sbjct: 367 VCMEMVETEKNYLSLLKLVVKFKEALECEI 396


>Z46795-1|CAA86788.1|  924|Caenorhabditis elegans Hypothetical
           protein T19E10.1a protein.
          Length = 924

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 176 VCVELVLTEKLLIDYLHMIVSFD--YDCEI 259
           VC+E+V TEK  +  L ++V F    +CEI
Sbjct: 367 VCMEMVETEKNYLSLLKLVVKFKEALECEI 396


>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
            protein Y46G5A.6 protein.
          Length = 1002

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 48   CASFFCDLNITLAIFIALSFVNLFFNSSNWHFF 146
            C   F  + I +  F  L F+N FF+  N HFF
Sbjct: 916  CLVVFIIVIIGVYSFGILLFLNFFFHFENMHFF 948


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = +2

Query: 74  YYFGHIYSFVICKF----VFQFL-*LAFFWFIFCTYIDIV 178
           Y FGHIY F I  +    +  FL   A FW   CT  +++
Sbjct: 185 YQFGHIYVFFINNWFNVKLDNFLVPNAIFWLFLCTITNVI 224


>U58738-1|AAB00602.1|  290|Caenorhabditis elegans Hypothetical
           protein F31A9.4 protein.
          Length = 290

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -2

Query: 146 KKMPIRGIEKQIYK*QSYKYGQSNIQITKKGCTLRYIMSLLLDIP 12
           +K+P   +EKQI++ +      + + IT K CT   ++  L ++P
Sbjct: 99  EKVPETALEKQIFEMERNPKLYTQLIITSKRCTTIEVVENLRNLP 143


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 77  YFGHIYSFVICKFVFQFL*LAFFWFIFC 160
           +F ++  F+I  F F  L L F W  FC
Sbjct: 55  FFTYVSFFIILIFGFAILPLFFLWVPFC 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,663,328
Number of Sequences: 27780
Number of extensions: 146139
Number of successful extensions: 402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)