Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30744
(354 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.1
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 1.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 1.9
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 4.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 20 7.5
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 20 7.5
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 20 7.5
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 20 7.5
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 20 7.5
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 1.1
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 291 YYNDSNWXCIMFSLYYIE 344
YYN++N+ + +++ YIE
Sbjct: 317 YYNNNNYKKLYYNINYIE 334
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 1.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 98 FVICKFVFQFL*LAFFWFIFCTYIDIVCVELVLTEK 205
F +C F + +W I+ D+V +LVL E+
Sbjct: 412 FPVCFVCFNLM----YWIIYLHISDVVADDLVLLEE 443
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 1.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 98 FVICKFVFQFL*LAFFWFIFCTYIDIVCVELVLTEK 205
F +C F + +W I+ D+V +LVL E+
Sbjct: 412 FPVCFVCFNLM----YWIIYLHISDVVADDLVLLEE 443
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 1.9
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +1
Query: 124 IPLIGIFLVYILYIYRYSMC 183
+PL+G +L++ + + S+C
Sbjct: 304 VPLLGKYLIFAMILVSISIC 323
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 1.9
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +1
Query: 124 IPLIGIFLVYILYIYRYSMC 183
+PL+G +L++ + + S+C
Sbjct: 304 VPLLGKYLIFAMILVSISIC 323
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 1.9
Identities = 6/20 (30%), Positives = 15/20 (75%)
Frame = +1
Query: 124 IPLIGIFLVYILYIYRYSMC 183
+PL+G F+++ + + +S+C
Sbjct: 300 VPLLGKFVLFTMILDTFSIC 319
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.0 bits (42), Expect = 4.3
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +1
Query: 112 ICFSIPLIGIFLVYIL 159
+CF IP++ +FL + +
Sbjct: 227 VCFVIPIMLLFLAFFV 242
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 7.5
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 294 YNDSNWXCIMFSLYYIE 344
YN++N+ + +++ YIE
Sbjct: 94 YNNNNYKQLCYNINYIE 110
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 7.5
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 294 YNDSNWXCIMFSLYYIE 344
YN++N+ + +++ YIE
Sbjct: 94 YNNNNYKQLCYNINYIE 110
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 7.5
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 294 YNDSNWXCIMFSLYYIE 344
YN++N+ + +++ YIE
Sbjct: 94 YNNNNYKQLCYNINYIE 110
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 7.5
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 294 YNDSNWXCIMFSLYYIE 344
YN++N+ + +++ YIE
Sbjct: 94 YNNNNYKQLCYNINYIE 110
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 7.5
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 294 YNDSNWXCIMFSLYYIE 344
YN++N+ + +++ YIE
Sbjct: 94 YNNNNYKQLCYNINYIE 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,430
Number of Sequences: 438
Number of extensions: 1778
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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