Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30739
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82266-5|CAB05183.2| 82|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 30 1.4
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 30 1.4
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 30 1.4
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 7.5
U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical p... 28 7.5
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 7.5
>Z82266-5|CAB05183.2| 82|Caenorhabditis elegans Hypothetical
protein F23B2.8 protein.
Length = 82
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 191 VKQSAPVIRTTTIDKQHCSSTTSETK-LIGAYAG 93
+KQ P+IR ++K +CSS T +K IG AG
Sbjct: 8 LKQMFPIIRKIFVEKSNCSSNTHHSKRSIGETAG 41
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = -3
Query: 533 SATLPSVTGRSKLSQSKRLIPVT*LHNLITQINVTL*T*LAMQXXXXXXXXXXIKDLTFP 354
SA++P+ +G ++++ S+ +IP T +HNL Q ++ L L + T P
Sbjct: 113 SASIPTTSG-TQINASQPMIPTTSMHNLAVQSSMMLENKLGQN---LNLKTTQLAQTTIP 168
Query: 353 EESKQIKLLKTVVALPSTITRRDVIRPSTT--LQVNKDTYF 237
+ ++ + + S + + PSTT QV+ T F
Sbjct: 169 QAQAAVEDWMKNICVDSLLDPKQAKTPSTTPSAQVSAGTTF 209
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -2
Query: 324 NSSCPSVNHNST*RHQTVDNLTGEQRHLFSSR*IQYINSKRQRDCKTKRSRHPHNNHRQ 148
NS N+N HQ + +Q SS ++Y N +Q+ R+ HP+NNH Q
Sbjct: 377 NSHVSRPNYNQPQHHQHHQQ-SHDQNSTISS--VEY-NQYQQKAGSYGRNYHPYNNHHQ 431
>U42841-14|AAC48172.3| 469|Caenorhabditis elegans Hypothetical
protein T17H7.7 protein.
Length = 469
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = -3
Query: 344 KQIKLLKTVVALPSTITRRDVIRPSTTLQVNKDTYFP--LDKFNILILRDNVTVKQSAPV 171
K + + K T+T +V+ P+T+ +D K N+ V++ V
Sbjct: 156 KTVSIQKKGDVTGETLTTMEVVAPTTSTISPEDLEVVQLFKKLNLSKEETKSIVERVEQV 215
Query: 170 IRTTTIDKQHCSSTTSE-TKLIGAYAGAGLVPAAINIRANSVRTFLEEQ 27
+R + K SSTT+E T ++ + + + + F+EE+
Sbjct: 216 VREKLMSKMDTSSTTTEVTTVVTTPSTTTTTTSTTQAPTTTTKEFIEEE 264
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 323 TVVALPSTITRRDVIRPSTTLQVNKDTYFPLDKFNILILRDNVTVKQSAPVIRTTTIDKQ 144
TVV +PST+ + PST + V T + + VT + + +T + K
Sbjct: 295 TVVTIPSTVVTSPITTPSTVVTV-PSTVVTVPSTAVTKPSTVVTAPSTVVTVPSTVVTKP 353
Query: 143 HCSSTTSET 117
+ T+S T
Sbjct: 354 NTVVTSSPT 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,927,654
Number of Sequences: 27780
Number of extensions: 262492
Number of successful extensions: 725
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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