Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30736
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069495-1|AAL39640.1|  923|Drosophila melanogaster LD22235p pro...    90   3e-18
AY058705-1|AAL13934.1|  463|Drosophila melanogaster LD42783p pro...    90   3e-18
AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein...    90   3e-18
AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB...    90   3e-18
AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA...    90   3e-18
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA...    29   6.8  

>AY069495-1|AAL39640.1|  923|Drosophila melanogaster LD22235p protein.
          Length = 923

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +1

Query: 262  VLMVPTVVLQELDNLKREQSTARKAIRWLELQLKNGSRFLRAQRPNQSKPLPLLKYPRKA 441
            ++++P  VL ELD+LK+     R  IRWLE + K G+R LRAQR N+S+PL LLK  RK 
Sbjct: 784  IVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKM 843

Query: 442  PAHINNFIQILEFCNHFVA 498
                + F+QI +FCNH VA
Sbjct: 844  DRDASVFLQIAQFCNHLVA 862


>AY058705-1|AAL13934.1|  463|Drosophila melanogaster LD42783p
           protein.
          Length = 463

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +1

Query: 262 VLMVPTVVLQELDNLKREQSTARKAIRWLELQLKNGSRFLRAQRPNQSKPLPLLKYPRKA 441
           ++++P  VL ELD+LK+     R  IRWLE + K G+R LRAQR N+S+PL LLK  RK 
Sbjct: 324 IVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKM 383

Query: 442 PAHINNFIQILEFCNHFVA 498
               + F+QI +FCNH VA
Sbjct: 384 DRDASVFLQIAQFCNHLVA 402


>AJ556817-1|CAD89222.1| 1177|Drosophila melanogaster SMG5 protein
            protein.
          Length = 1177

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +1

Query: 262  VLMVPTVVLQELDNLKREQSTARKAIRWLELQLKNGSRFLRAQRPNQSKPLPLLKYPRKA 441
            ++++P  VL ELD+LK+     R  IRWLE + K G+R LRAQR N+S+PL LLK  RK 
Sbjct: 1038 IVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKM 1097

Query: 442  PAHINNFIQILEFCNHFVA 498
                + F+QI +FCNH VA
Sbjct: 1098 DRDASVFLQIAQFCNHLVA 1116


>AE014134-2425|AAF53352.1| 1177|Drosophila melanogaster CG8954-PB,
            isoform B protein.
          Length = 1177

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +1

Query: 262  VLMVPTVVLQELDNLKREQSTARKAIRWLELQLKNGSRFLRAQRPNQSKPLPLLKYPRKA 441
            ++++P  VL ELD+LK+     R  IRWLE + K G+R LRAQR N+S+PL LLK  RK 
Sbjct: 1038 IVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKM 1097

Query: 442  PAHINNFIQILEFCNHFVA 498
                + F+QI +FCNH VA
Sbjct: 1098 DRDASVFLQIAQFCNHLVA 1116


>AE014134-2424|AAF53351.1| 1177|Drosophila melanogaster CG8954-PA,
            isoform A protein.
          Length = 1177

 Score = 90.2 bits (214), Expect = 3e-18
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = +1

Query: 262  VLMVPTVVLQELDNLKREQSTARKAIRWLELQLKNGSRFLRAQRPNQSKPLPLLKYPRKA 441
            ++++P  VL ELD+LK+     R  IRWLE + K G+R LRAQR N+S+PL LLK  RK 
Sbjct: 1038 IVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHLRAQRDNESQPLSLLKISRKM 1097

Query: 442  PAHINNFIQILEFCNHFVA 498
                + F+QI +FCNH VA
Sbjct: 1098 DRDASVFLQIAQFCNHLVA 1116


>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
            protein.
          Length = 1543

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 20/71 (28%), Positives = 28/71 (39%)
 Frame = +3

Query: 138  HHKYASWNAADSRRHLHYSYLTPQXXXXXXXXXXXXYSQQLCAHGAYSCATRTGQFEARA 317
            HH+ A+    D    LHY+Y+ P+             S Q  A GA   +T TG      
Sbjct: 1416 HHQQATKTNPDGGDKLHYNYVKPEDCQCECHEAERGESSQATA-GAGDTSTETGTGTGTG 1474

Query: 318  EHST*SYPLVR 350
              S  S  L++
Sbjct: 1475 SESLASVELLQ 1485


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,216,143
Number of Sequences: 53049
Number of extensions: 601791
Number of successful extensions: 1926
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)