Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30735
(327 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-6|AAC48295.2| 104|Caenorhabditis elegans Ribosomal prote... 66 6e-12
Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical pr... 30 0.45
Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical pr... 30 0.45
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 29 0.79
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 28 1.4
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 28 1.4
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical pr... 27 3.2
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 27 3.2
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 27 3.2
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 27 3.2
AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical ... 27 4.2
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 26 7.4
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 26 7.4
AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical ... 26 7.4
Z98877-13|CAB63410.2| 254|Caenorhabditis elegans Hypothetical p... 25 9.7
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 25 9.7
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 25 9.7
U41556-11|AAK39190.2| 365|Caenorhabditis elegans Hypothetical p... 25 9.7
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 25 9.7
AF100662-2|AAC68976.1| 478|Caenorhabditis elegans Hypothetical ... 25 9.7
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 25 9.7
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 25 9.7
>U00033-6|AAC48295.2| 104|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 36 protein.
Length = 104
Score = 66.1 bits (154), Expect = 6e-12
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +3
Query: 33 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 212
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 213 AMELLKVSKDKRAL 254
+E+L++SKDKRAL
Sbjct: 59 VLEMLRISKDKRAL 72
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 236 KRQACSEFLKRRLGTHIRAKRKREELSNVL 325
K + +FLKRR+GTH RAK KREEL NV+
Sbjct: 67 KDKRALKFLKRRIGTHRRAKGKREELQNVI 96
>Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical
protein T08G5.5b protein.
Length = 926
Score = 29.9 bits (64), Expect = 0.45
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 117 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALS 257
R LK L+ HS + ++ ++ HA YE+RA+ L ++ + ++AL+
Sbjct: 679 RKRLLKFLEVSHSYSPQTVLLQLAPHAFYEERALILGRLKQHEQALA 725
>Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical
protein T08G5.5a protein.
Length = 923
Score = 29.9 bits (64), Expect = 0.45
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 117 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALS 257
R LK L+ HS + ++ ++ HA YE+RA+ L ++ + ++AL+
Sbjct: 676 RKRLLKFLEVSHSYSPQTVLLQLAPHAFYEERALILGRLKQHEQALA 722
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 29.1 bits (62), Expect = 0.79
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 114 IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 248
++ ++ L T + L+REV G Y++R E LK+ K+ +
Sbjct: 140 VKQGKINELATSPDAYKLKLLREVAGTRVYDERKEESLKILKETK 184
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 129 LKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 248
L+ Q +HS+ VR++ + + EK+ +EL++++K K+
Sbjct: 732 LENDQMEHSEKVREMKKVYANATRKEKKKVELVRMTKGKK 771
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 129 LKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 248
L+ Q +HS+ VR++ + + EK+ +EL++++K K+
Sbjct: 732 LENDQMEHSEKVREMKKVYANATRKEKKKVELVRMTKGKK 771
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 SVRNHGSSF*NRSRPAKRPQNN*NIRWPQGYH-RQSHQN*AS*TKGSSNETLQVCP*FS 175
S RNHG F N S P NN N+ G R S + + ++ SS T+ FS
Sbjct: 413 SSRNHGGGFSNTSVSTVIPANNGNVSLSHGRDGRDSVSSVRTMSRASSTSTVYAGSTFS 471
>Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical
protein C25G4.7 protein.
Length = 349
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 162 VRDLVREVVGHAQYEKRAMELLKV 233
+RD + EV+G+ Q++K +E+L V
Sbjct: 133 IRDFLCEVIGNRQFKKYKLEILTV 156
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 3 QSEIMAPRFEIAVGLRK----GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRD 170
++E++A R ++ LR+ H+ +++ K + K I T+ KF+R+
Sbjct: 1126 RTELLAARPQMPSSLRQLREQPHREVQLAFNAKWGSSKKSEITVNAQLEQSTEQKKFIRN 1185
Query: 171 LVREVVGHAQYE 206
+ RE G +YE
Sbjct: 1186 IEREYKGIPEYE 1197
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 3 QSEIMAPRFEIAVGLRK----GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRD 170
++E++A R ++ LR+ H+ +++ K + K I T+ KF+R+
Sbjct: 1126 RTELLAARPQMPSSLRQLREQPHREVQLAFNAKWGSSKKSEITVNAQLEQSTEQKKFIRN 1185
Query: 171 LVREVVGHAQYE 206
+ RE G +YE
Sbjct: 1186 IEREYKGIPEYE 1197
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 SVRNHGSSF*NRSRPAKRPQNN*NIRWPQGYH-RQSHQN*AS*TKGSSNETLQVCP*FS 175
S RNHG F N S P NN N+ G R S + + ++ SS T+ FS
Sbjct: 413 SSRNHGGGFSNTSVSTVIPANNGNVSLSHGRDGRDSVSSVRTMSRASSTSTVYAGSTFS 471
>AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical
protein H23N18.4 protein.
Length = 475
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 171 LVREVVGHAQYEKRAMELLKV 233
+V+++V + +YEK A ELL+V
Sbjct: 434 IVKDMVSNPKYEKNAQELLRV 454
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 3 QSEIMAPRFEIAVGLRK----GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRD 170
++E++A R ++ LR+ H+ +++ K + K I T+ KF+R+
Sbjct: 1126 RTELLAARPQMPSSLRQLREQPHREVQLALNAKWGSSKKSEITFNAQLEQSTEQKKFLRN 1185
Query: 171 LVREVVGHAQYE 206
+ RE G +YE
Sbjct: 1186 IEREYKGIPEYE 1197
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 3 QSEIMAPRFEIAVGLRK----GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRD 170
++E++A R ++ LR+ H+ +++ K + K I T+ KF+R+
Sbjct: 1126 RTELLAARPQMPSSLRQLREQPHREVQLALNAKWGSSKKSEITFNAQLEQSTEQKKFLRN 1185
Query: 171 LVREVVGHAQYE 206
+ RE G +YE
Sbjct: 1186 IEREYKGIPEYE 1197
>AC006834-4|AAF40012.1| 392|Caenorhabditis elegans Hypothetical
protein ZK973.8 protein.
Length = 392
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 135 GLQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 233
G T S VRD + V+G+ +YE E+L V
Sbjct: 126 GYSTPASGAVRDFLVGVIGNRRYENCMFEILTV 158
>Z98877-13|CAB63410.2| 254|Caenorhabditis elegans Hypothetical
protein Y69H2.13 protein.
Length = 254
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -2
Query: 299 SSWRGCVCPIVASRTQSTLVF*HLK*LHSPLLILSVSD 186
S+W CVCP+ S + ++ + ++ P+ SD
Sbjct: 144 STWSSCVCPLPCSNQEYSVTWSKANFVNMPITCEKSSD 181
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 174 VREVVGHAQYEKRAMELLKV 233
VR++V +++YE A ELLKV
Sbjct: 434 VRDMVTNSKYEVNAQELLKV 453
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 174 VREVVGHAQYEKRAMELLKV 233
VR++V +++YE A ELLKV
Sbjct: 435 VRDMVTNSKYEVNAQELLKV 454
>U41556-11|AAK39190.2| 365|Caenorhabditis elegans Hypothetical
protein C25B8.5 protein.
Length = 365
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 151 CFV*RPFSLAGLILMALSVIPLRPADILVVLWPFRRPTAISKRGA 17
C V F+ GL + LS+ L ++ WP ++SKR A
Sbjct: 62 CAVVHYFNWIGLAVSGLSLTLLNVDKLIYFRWPLNYDRSMSKRRA 106
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -3
Query: 172 KSRTNLECFV*RPFSLAGLILMALSVIPLRPADILVVLWP 53
K RTN+ + +P ++ ++ L+++ + A+ V+ WP
Sbjct: 945 KCRTNILAKLLKPLAILDTVVNHLNLVRKKHANFPVITWP 984
>AF100662-2|AAC68976.1| 478|Caenorhabditis elegans Hypothetical
protein H34C03.1 protein.
Length = 478
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -1
Query: 300 FLLARMCVPNRRFKNSEHACLLTP*VTP*PSSHIE-RVRQLRVLNHGQTWSVSFEDPL 130
F MC+P R + AC LT S IE + + LN+G TW + D +
Sbjct: 101 FFSISMCMPRHRHPSILRACRLT-------VSAIECLTEETKSLNNGTTWQDLYTDEI 151
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -3
Query: 172 KSRTNLECFV*RPFSLAGLILMALSVIPLRPADILVVLWP 53
K RTN+ + +P ++ ++ L+++ + A+ V+ WP
Sbjct: 945 KCRTNILAKLLKPLAILDTVVNHLNLVRKKHANFPVITWP 984
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMEL 224
+ + D + P+ + L+ + +KFV DL + + EKRA EL
Sbjct: 3142 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 3186
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMEL 224
+ + D + P+ + L+ + +KFV DL + + EKRA EL
Sbjct: 4045 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 4089
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMEL 224
+ + D + P+ + L+ + +KFV DL + + EKRA EL
Sbjct: 4999 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 5043
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMEL 224
+ + D + P+ + L+ + +KFV DL + + EKRA EL
Sbjct: 5902 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 5946
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMEL 224
+ + D + P+ + L+ + +KFV DL + + EKRA EL
Sbjct: 6805 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 6849
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 87 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMEL 224
+ + D + P+ + L+ + +KFV DL + + EKRA EL
Sbjct: 7708 EAVNDVPASVEPSAV-ALRDRAAKFVSDLEKNIQKTGDDEKRADEL 7752
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,071,019
Number of Sequences: 27780
Number of extensions: 123121
Number of successful extensions: 298
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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