Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30734
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 121 5e-28
07_01_0578 + 4295386-4296489,4297394-4297507 119 3e-27
10_02_0199 + 6668902-6669293,6669825-6669882 35 0.056
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.17
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.23
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.40
05_03_0163 + 9070781-9071320 31 0.69
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 31 0.91
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 31 1.2
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 31 1.2
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 30 1.6
06_01_0017 + 189346-189561,189614-189905,190024-190043 30 1.6
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 2.1
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 30 2.1
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 2.8
08_02_1285 - 25881091-25881798 29 2.8
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 2.8
06_03_0871 - 25562767-25563509,25563889-25565776 29 3.7
03_01_0092 - 731069-731434,731569-733080 29 4.9
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 28 6.4
06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 28 6.4
05_04_0055 + 17536241-17536729,17537297-17537401 28 6.4
04_04_0463 - 25397837-25399693,25402136-25402405 28 6.4
04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043 28 6.4
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 6.4
01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890 28 6.4
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 28 8.5
07_03_1636 + 28290642-28291574 28 8.5
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 28 8.5
03_01_0147 - 1170481-1171260,1171332-1171511 28 8.5
01_06_1832 + 40204513-40204722,40205200-40205562,40206038-40206553 28 8.5
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 121 bits (292), Expect = 5e-28
Identities = 57/91 (62%), Positives = 59/91 (64%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLR 123
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH IE P FP
Sbjct: 124 RIAVASALAATAVPSLVLARGHRIEGVPEFP 154
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKXQRLRAGKGKMRNRRRIQRKG 690
+PE PLVV+D ++ I KT Q++ L+++ A++D K +RAGKGKMRNRR I RKG
Sbjct: 150 VPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKG 209
Query: 691 P 693
P
Sbjct: 210 P 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +3
Query: 75 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 252 HK 257
H+
Sbjct: 63 HQ 64
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 119 bits (286), Expect = 3e-27
Identities = 55/91 (60%), Positives = 58/91 (63%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLR 124
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH IE P P
Sbjct: 125 RVAVASALAATSVPSLVLARGHRIETVPELP 155
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKXQRLRAGKGKMRNRRRIQRKG 690
+PELPLV++D + I KT QA+ L+++ A++D K +R GKGKMRNRR I RKG
Sbjct: 151 VPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKG 210
Query: 691 P 693
P
Sbjct: 211 P 211
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +3
Query: 84 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGH+
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 35.1 bits (77), Expect = 0.056
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 369 PPRHMLPKAP*PDLWVPPP 313
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 202
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 202
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>05_03_0163 + 9070781-9071320
Length = 179
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 343
R GGWSQ AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 31.1 bits (67), Expect = 0.91
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAV 292
EAALLR G W++ + + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = -2
Query: 324 VPPPRTRGIRATARP----VPHDSALVC---DQPPCSRSKAASSSWT*KREHH*PGPDV 169
+PP T R P VP +SA +C D P SRS AAS R HH P +V
Sbjct: 56 IPPSPTTKPRLLPLPHPVIVPGESASICVISDDRPKSRSPAASDLLDASRSHHLPVSEV 114
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 321 PPPRTRGIRATARPVPHDSA-LVCDQPPCSRSKA 223
PPPRTR + PVP SA + QPP R++A
Sbjct: 166 PPPRTRQVNPAPPPVPSPSAPPLPPQPPPPRNQA 199
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +2
Query: 209 QELEAALLREQGGWSQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 373
+++ A ++GG S S S G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 374 MFAPTKP-WR 400
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>06_01_0017 + 189346-189561,189614-189905,190024-190043
Length = 175
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 505 NNVSSSLNERWDAGSSNGCCQGR--SPLSEVDATVPAP 398
N+ +S L+ +WDAGS + SPLS V A AP
Sbjct: 103 NDSTSKLSFKWDAGSCSSASSSAMYSPLSAVSAPAKAP 140
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 202
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 321 PPPRTRGIRATARPVPHDSALVCDQPPCSRSKAASS 214
PPP ++G A P P + V ++PP R + S+
Sbjct: 163 PPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSA 198
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/83 (27%), Positives = 34/83 (40%)
Frame = +2
Query: 116 RDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSQTSAESWGTGRAVA 295
R AG + PP R G TSG G S + V+ + +S + + S+G G
Sbjct: 100 RHAAGGGETPPARRGGGRTSGGGG--SSYSVEHSPSP--SPLHPYSDSGSGSYGGGLVAN 155
Query: 296 RIPRVRGGGTHRSGQGAFGNMCR 364
+ GGG R + N+ R
Sbjct: 156 SRAKGGGGGAPRGNETVIPNIIR 178
>08_02_1285 - 25881091-25881798
Length = 235
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 110 EERDGAGCSQAPPVRVQGAHTSGPG 184
EE DG G ++A V +GAH +G G
Sbjct: 173 EEEDGEGSAEAMEVEEEGAHLAGAG 197
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 47 ASLK*RNESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 202
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>06_03_0871 - 25562767-25563509,25563889-25565776
Length = 876
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 285 RPVPHDSALVCDQPPCSRSKAASSSWT 205
RP D+ LV D+ PCS S A++++ T
Sbjct: 843 RPAMRDAVLVLDRIPCSSSSASTTTTT 869
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = -2
Query: 366 PRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPCSRSKAASSSWT*KREHH 187
P H++P P P L P P+++ R P A+SS W K E H
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAPPPQEQHDTAASGGGGGASSSRWP-KAEVH 325
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 171 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHKPVPNHGVPD 284
RP + DV S S +S P SK++GH V HG D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>06_01_0010 -
151694-151951,152433-152489,152683-152774,153432-153531,
153585-154211,154300-154638,154740-154991,155083-155556
Length = 732
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 535 LQPREARESFNNVSSSLNERWDAGSSNGCCQGRS 434
++PRE ++ V S+ NE WD ++G G +
Sbjct: 673 VEPRERGDNEQRVVSAYNEAWDVAGADGRAGGEA 706
>05_04_0055 + 17536241-17536729,17537297-17537401
Length = 197
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 396 GGAGTVASTSDSGERPWQQPLLLPASQRSFRLEDTLLKDSRA 521
GGA T + SD G R P+ + Q F LED+L D A
Sbjct: 146 GGAATTTTRSDDGAR--APPIEIEDLQLVFDLEDSLFLDVEA 185
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 547 GLCQLQPREARESFNNVSSSLNERWDAGSSNGCCQGRSPLSEVDATVPAP 398
GLC P + SS R A +S C+G + ++ +VPAP
Sbjct: 15 GLCVHVPEAEEGEREDCSSERRRRLPAAASGARCRGEAAVTVGPESVPAP 64
>04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043
Length = 436
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -3
Query: 293 RQHVRYPMIRHWFVTSLLAHAVRLPRVLGHRNVNIIDQVRTYGRL 159
++HV +P + L+ A RL R+L H + ++ R L
Sbjct: 5 KKHVLFPFTSKGHIAGFLSLASRLHRILPHATITLVSTPRNVAAL 49
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
R+ GG S S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
>01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890
Length = 595
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +1
Query: 181 WSMMFTFLCPRTRGSLTA*ARRLVTNQCRIMGYRTCCRPNSSCPWWWYP 327
W++ FT P + +T V + +++ Y + S CP W P
Sbjct: 543 WNIEFTPPSPESFNHMTEDGEPCVDSHAQVLAYYSLAGRRSDCPQWVIP 591
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 218 EAALLREQGG-WSQTSAE-SWGTGRAVARIPRVRGGGTHRSG 337
EAAL E GG W+ + E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>07_03_1636 + 28290642-28291574
Length = 310
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 369 PPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPCSRSK 226
PP + AP +VPPP +R + P P + L PP ++++
Sbjct: 154 PPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPAKLSPPPPPQTQTQ 201
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -2
Query: 381 ANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPCSRSKAASS 214
A+ RPPR P P PPP + ARP P A+ PP + + A ++
Sbjct: 65 ASSRPPR---PPPPSTTTAPPPPAAPAV-TPARPPPQQPAVAVAAPPPATTMATAT 116
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 41 GIASLK*R-NESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 202
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>01_06_1832 + 40204513-40204722,40205200-40205562,40206038-40206553
Length = 362
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 550 PGLCQLQPREARESFNNVSSSLNERWDAGSS 458
PGL +L P+ A E + +S+NE W A S
Sbjct: 74 PGLPELLPKVAMEDRTVIITSVNEAWAAPGS 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,282,408
Number of Sequences: 37544
Number of extensions: 474179
Number of successful extensions: 1830
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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