Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30731
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 136 1e-32
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 136 1e-32
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 56 3e-08
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 56 3e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 50 2e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 48 5e-06
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 40 0.001
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 40 0.001
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 40 0.001
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 38 0.010
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 38 0.010
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 33 0.29
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 33 0.29
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.29
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 33 0.29
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 33 0.29
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 33 0.29
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 32 0.38
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.67
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical ... 30 2.1
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 30 2.1
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.6
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 3.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 3.6
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 4.7
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 28 8.3
AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 136 bits (330), Expect = 1e-32
Identities = 63/70 (90%), Positives = 69/70 (98%)
Frame = +1
Query: 49 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 228
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 229 KDEQDRCITL 258
KDEQ+RCIT+
Sbjct: 61 KDEQERCITI 70
Score = 134 bits (323), Expect = 8e-32
Identities = 64/104 (61%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Frame = +2
Query: 452 CVWCVCTNRNSTA-SGYCRAIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 628
CV VC + IKP+LFMNKMDR +QTFQRIVEN+NVIIA
Sbjct: 143 CVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIA 202
Query: 629 TYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 760
TY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA K
Sbjct: 203 TYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGK 246
Score = 111 bits (266), Expect = 7e-25
Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 IKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEVTA 410
IKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSEVTA
Sbjct: 70 IKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTA 129
Query: 411 ALRVTDGALXXXXXXXXXXXQTETVLRQAIAER 509
ALRVTDGAL QTETVLRQAIAER
Sbjct: 130 ALRVTDGALVVVDCVSGVCVQTETVLRQAIAER 162
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 136 bits (330), Expect = 1e-32
Identities = 63/70 (90%), Positives = 69/70 (98%)
Frame = +1
Query: 49 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 228
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 229 KDEQDRCITL 258
KDEQ+RCIT+
Sbjct: 61 KDEQERCITI 70
Score = 134 bits (323), Expect = 8e-32
Identities = 64/104 (61%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Frame = +2
Query: 452 CVWCVCTNRNSTA-SGYCRAIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 628
CV VC + IKP+LFMNKMDR +QTFQRIVEN+NVIIA
Sbjct: 143 CVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIA 202
Query: 629 TYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 760
TY DD GPMG + VDPS G+VGFGSGLHGWAFTLKQF+EMYA K
Sbjct: 203 TYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGK 246
Score = 108 bits (259), Expect = 5e-24
Identities = 63/93 (67%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 IKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSEVTA 410
IKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSEVTA
Sbjct: 70 IKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTA 129
Query: 411 ALRVTDGALXXXXXXXXXXXQTETVLRQAIAER 509
AL VTDGAL QTETVLRQAIAER
Sbjct: 130 ALGVTDGALVVVDCVSGVCVQTETVLRQAIAER 162
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = +1
Query: 100 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 258
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+ R+ D+R+DEQ R IT+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITM 71
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3
Query: 354 LINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 500
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ I
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVI 132
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Frame = +2
Query: 518 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY-------NDDGGPMGE----V 664
IL +NK+DR YQ R++E VN I+ +D G + E +
Sbjct: 139 ILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKL 198
Query: 665 RVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 760
DP+KG+V F S LH +AF + F+++ A+K
Sbjct: 199 HFDPAKGNVIFSSALHSYAFGCEDFAQIAAEK 230
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = +1
Query: 100 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 258
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+ R+ D+R+DEQ R IT+
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITM 71
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3
Query: 354 LINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAI 500
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ I
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVI 132
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Frame = +2
Query: 518 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY-------NDDGGPMGE----V 664
IL +NK+DR YQ R++E VN I+ +D G + E +
Sbjct: 139 ILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCISQVLGGIVLEDDTWGNIEESEAKL 198
Query: 665 RVDPSKGSVGFGSGLHGWAFTLKQFSEMYADK 760
DP+KG+V F S LH +AF + F+++ A+K
Sbjct: 199 HFDPAKGNVIFSSALHSYAFGCEDFAQIAAEK 230
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/87 (37%), Positives = 46/87 (52%)
Frame = +3
Query: 306 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETV 485
V I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE
Sbjct: 189 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 245
Query: 486 LRQAIAERSSLFCS*TKWTVLFLSSNL 566
+R AI ER ++ +K L L L
Sbjct: 246 IRHAIQERLAVTLCISKIDRLLLELKL 272
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 82 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDRCITL 258
+MD +RN+++ H+ HGK+T D L+ + A + RFTD E+ R ++
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSI 184
Query: 259 NLRP 270
+P
Sbjct: 185 KSQP 188
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/87 (37%), Positives = 46/87 (52%)
Frame = +3
Query: 306 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETV 485
V I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE
Sbjct: 64 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 120
Query: 486 LRQAIAERSSLFCS*TKWTVLFLSSNL 566
+R AI ER ++ +K L L L
Sbjct: 121 IRHAIQERLAVTLCISKIDRLLLELKL 147
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDRCITLN 261
MD +RN+++ H+ HGK+T D L+ + A + RFTD E+ R ++
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIK 60
Query: 262 LRP 270
+P
Sbjct: 61 SQP 63
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = +3
Query: 348 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERSSLFC 524
G IN+ID+PGHVDF+ EV ALRV DGA+ QT TV RQ C
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFIC 169
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 103 IRNMSVIAHVDHGKSTLTDSLVSKAGII 186
IRN+ + AH+D GK+T+T+ ++ AG I
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRI 71
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +3
Query: 345 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 437
+G+L+NLID+PGHVDFS+EV+ +L V DG L
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAVCDGIL 130
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 103 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITL 258
IRN ++AHVDHGKSTL D L+ G + G+ + D + E++R IT+
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAVP---PGQKQMLDKLQVERERGITV 90
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/83 (34%), Positives = 41/83 (49%)
Frame = +3
Query: 249 HHIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 428
H K ++ F ++E + + + + KG INLID+PGHVDF EV +RV D
Sbjct: 57 HVDKGNTVTDFLDIERERGITVQSAAVN-LDWKGHRINLIDTPGHVDFRVEVERCVRVLD 115
Query: 429 GALXXXXXXXXXXXQTETVLRQA 497
G + QT TV RQ+
Sbjct: 116 GIVVVIDGSAGVQPQTLTVWRQS 138
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 103 IRNMSVIAHVDHGKSTLTDSLVSKAGII--AGARAGETRFTDTRKDEQDRCITL 258
+RN+ VIAHVD GK+T+T+ L+ AG I AG TD E++R IT+
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITV 78
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 261
N+ I HVDHGK+TLT ++ GA+ + D +E+ R IT+N
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 101
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 261
N+ I HVDHGK+TLT ++ GA+ + D +E+ R IT+N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 261
N+ I HVDHGK+TLT ++ GA+ + D +E+ R IT+N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCSSS 288
N+ I H+DHGK+TLT ++ A+ + D K+E+ R IT+N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 289 LKR 297
L+R
Sbjct: 107 LRR 109
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 109 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCSSS 288
N+ I H+DHGK+TLT ++ A+ + D K+E+ R IT+N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 289 LKR 297
L+R
Sbjct: 107 LRR 109
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 85 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 180
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +1
Query: 34 HKPSKMVNFTVDEIRGMMDKKRN-IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 210
H P K+ DE+ M ++KRN + N A+++ + +S+ S I G A
Sbjct: 610 HVPEKVAEDIADEVARMTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEGVNATLQ 669
Query: 211 RFTDTRKDEQDRCITLNLRPSLCSSSLKRKI*YSSQTLTSV 333
R +QD ++L L + R+ T+TS+
Sbjct: 670 TIEKQRVQQQDGGNLMDLSALLTNQVRNRESAARRPTITSI 710
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = -1
Query: 505 SAIA*RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRW 326
+AI ++ + T +T STT+ P +T + + +E T S+ P L RW
Sbjct: 691 TAIFAEASTGIITTDEETTSTTSTTPEITSTKEIVTESAITQTSVSVVESSTPRQLPERW 750
Query: 325 SGFVMNTK 302
V K
Sbjct: 751 KAIVNKFK 758
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 115 SVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCSSSLK 294
+++ D GK+TL ++L S AG G A +F TR+ C +N R SS
Sbjct: 51 AIVGVADSGKTTLLEALTSGAGGDIGGIAMLDKFMLTRRRFNKFCSHINYRNQYPSSLSV 110
Query: 295 RKI*Y 309
R + Y
Sbjct: 111 RSLLY 115
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 88 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 213
D +R ++++ HVDHGK+TL D++ + I AG G T+
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM-RNSQIAAGEFGGITQ 191
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRS-AAVTSEEKSTCPGESIKLIKKP 347
+T + T T T +TTT P+ T + A TSE +T P + + KP
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKK 350
+T + T + +TTT APS T + VT K P E KL+KK
Sbjct: 764 TTAAPSTKPAEETTTTTEAPSTT-TKPVTVAVKKVSPEEMEKLVKK 808
>AL009246-7|CAA15840.2| 347|Caenorhabditis elegans Hypothetical
protein C47F8.8 protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 464 HTRHTVNNHKGSISDTECSCYFRREINV 381
H T H G IS T C+ +FRR I +
Sbjct: 15 HNTETTRRHFGIISCTACAAFFRRSIGM 42
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 457 DTQSTTTRAPSVTRSAAVTSEEKSTCPGESIK 362
D+ +T R+P TRS ++TS + C G+ I+
Sbjct: 174 DSANTILRSPYSTRSDSITSVDSGQCSGDQIE 205
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCP 377
ST + T T T +TTT AP+ T + T+E P
Sbjct: 210 STSTTTTTTTSTTTTTTEAPTTTTTIKTTTESIEPIP 246
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 136 DRRGRSQTCCGYSASCPSSHG 74
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 136 DRRGRSQTCCGYSASCPSSHG 74
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 51 GEFHGRRDPWDDGQEAEYPQHVCDR 125
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 51 GEFHGRRDPWDDGQEAEYPQHVCDR 125
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -1
Query: 469 THTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESI---KLIKKPFSLF 335
T T T +TTT AP++ + + T+E+ +T +I + +K FS F
Sbjct: 218 TTTTTTTTTTTEAPTMPEAVSSTTEQSTTTTAAAIIAEETKEKEFSAF 265
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein
R08E3.1b protein.
Length = 1465
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 398
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
R08E3.1a protein.
Length = 1512
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRSAAVTS 398
STVSV T T ST+T APS ++S V++
Sbjct: 1044 STVSVITSTTMLPSTSTVAPSTSQSTIVST 1073
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 490 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 383
++T + T T T +TTT P+ + A + +KST
Sbjct: 163 KTTTTTTTSTTSTSTTTTEKPTTATTTARVTPKKST 198
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Frame = +1
Query: 97 RNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGARAGETRFT-----DTRK 231
+++ N+ V+ HVD GKSTL L+ ++ AR G+ F D +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 232 DEQDRCITLNLRPSLCSSSLKR 297
+E++R +T+++ + +S +R
Sbjct: 228 EERERGVTMDIGRTSFETSHRR 249
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Frame = +1
Query: 97 RNIRNMSVIAHVDHGKSTLTDSLVSKAGII----------AGARAGETRFT-----DTRK 231
+++ N+ V+ HVD GKSTL L+ ++ AR G+ F D +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 232 DEQDRCITLNLRPSLCSSSLKR 297
+E++R +T+++ + +S +R
Sbjct: 246 EERERGVTMDIGRTSFETSHRR 267
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKST 383
+T + + T + +TTT AP+ T S VT+ E +T
Sbjct: 235 TTTTTESPTTEASTTTTEAPTTTTSEEVTTTEITT 269
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 370 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLM 254
S+ L+ PF L +R +G+ + FSS S + MAV ++
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVL 106
>AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical
protein T05A8.6 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 487 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKP 347
+T T T T TTT+AP T + A T+ + C S ++ P
Sbjct: 74 TTPGATTVTTTTAPTTTKAPDCTTTTAPTTTKAPDCTTCSQDILTDP 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,140,382
Number of Sequences: 27780
Number of extensions: 389950
Number of successful extensions: 1536
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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