Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30725
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X12791-1|CAA31280.1| 144|Homo sapiens protein ( Human mRNA for ... 107 2e-23
BC010947-1|AAH10947.1| 144|Homo sapiens signal recognition part... 107 2e-23
BC017830-1|AAH17830.1| 110|Homo sapiens SRP19 protein protein. 103 4e-22
X77548-1|CAA54673.1| 614|Homo sapiens Ret fused gene protein. 30 3.1
L49399-1|AAC37591.1| 614|Homo sapiens ARA70 protein. 30 3.1
BC012736-1|AAH12736.1| 575|Homo sapiens NCOA4 protein protein. 30 3.1
BC001562-1|AAH01562.1| 614|Homo sapiens NCOA4 protein protein. 30 3.1
AL450342-6|CAI14479.1| 575|Homo sapiens nuclear receptor coacti... 30 3.1
AL450342-5|CAI14478.1| 614|Homo sapiens nuclear receptor coacti... 30 3.1
AL162047-1|CAB82390.1| 614|Homo sapiens hypothetical protein pr... 30 3.1
AL732423-2|CAM17478.1| 788|Homo sapiens mitogen-activated prote... 29 9.6
AL732423-1|CAM17479.1| 748|Homo sapiens mitogen-activated prote... 29 9.6
AL732326-2|CAM23143.1| 788|Homo sapiens mitogen-activated prote... 29 9.6
AL732326-1|CAM23142.1| 748|Homo sapiens mitogen-activated prote... 29 9.6
AK131477-1|BAD18622.1| 788|Homo sapiens protein ( Homo sapiens ... 29 9.6
AK131412-1|BAD18559.1| 748|Homo sapiens protein ( Homo sapiens ... 29 9.6
>X12791-1|CAA31280.1| 144|Homo sapiens protein ( Human mRNA for
19kD protein of signal recognition particle (SRP). ).
Length = 144
Score = 107 bits (256), Expect = 2e-23
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVE-NKLYSRECSKEML 177
IYPAYLN+KKT+AEGRR+P S VENPT EI+DV A GL V +E NK+YSRE ++++
Sbjct: 18 IYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQ 77
Query: 178 YRGRIRVQIKNDDGAPVNPEFPTRES 255
YRGR+RVQ+K +DG+ +FP+R+S
Sbjct: 78 YRGRVRVQLKQEDGSLCLVQFPSRKS 103
>BC010947-1|AAH10947.1| 144|Homo sapiens signal recognition
particle 19kDa protein.
Length = 144
Score = 107 bits (256), Expect = 2e-23
Identities = 51/86 (59%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVE-NKLYSRECSKEML 177
IYPAYLN+KKT+AEGRR+P S VENPT EI+DV A GL V +E NK+YSRE ++++
Sbjct: 18 IYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQ 77
Query: 178 YRGRIRVQIKNDDGAPVNPEFPTRES 255
YRGR+RVQ+K +DG+ +FP+R+S
Sbjct: 78 YRGRVRVQLKQEDGSLCLVQFPSRKS 103
>BC017830-1|AAH17830.1| 110|Homo sapiens SRP19 protein protein.
Length = 110
Score = 103 bits (246), Expect = 4e-22
Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 IYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVE-NKLYSRECSKEML 177
IYPAYLN+KKT+AEGRR+P S VENPT EI+DV A GL V +E NK+YSRE ++++
Sbjct: 18 IYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWNRDVQ 77
Query: 178 YRGRIRVQIKNDDGAPVNPEFPT 246
YRGR+RVQ+K +DG+ +FP+
Sbjct: 78 YRGRVRVQLKQEDGSLCLVQFPS 100
>X77548-1|CAA54673.1| 614|Homo sapiens Ret fused gene protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>L49399-1|AAC37591.1| 614|Homo sapiens ARA70 protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>BC012736-1|AAH12736.1| 575|Homo sapiens NCOA4 protein protein.
Length = 575
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>BC001562-1|AAH01562.1| 614|Homo sapiens NCOA4 protein protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>AL450342-6|CAI14479.1| 575|Homo sapiens nuclear receptor
coactivator 4 protein.
Length = 575
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>AL450342-5|CAI14478.1| 614|Homo sapiens nuclear receptor
coactivator 4 protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>AL162047-1|CAB82390.1| 614|Homo sapiens hypothetical protein
protein.
Length = 614
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +1
Query: 13 YLNSKKTLAEGRRLPKSVCVENPTHQE---IRDVLLATGLRVGVENKLYSRECSKEMLYR 183
+L +KK L+ + + V+N HQ+ + +V A + C KE LY+
Sbjct: 372 HLEAKKPLSTPSMVTEDWLVQN--HQDPCKVEEVCRANEPCTSFAECVCDENCEKEALYK 429
Query: 184 GRIRVQIKNDDGAPVNPE 237
++ + K+ +G PV P+
Sbjct: 430 WLLKKEGKDKNGMPVEPK 447
>AL732423-2|CAM17478.1| 788|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 788
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 26 KRLSQKDADFLNLFVSKTLHIKKLEMFFLPLGYE*GLKTNCIQENAA 166
+ L +K+ ++ NL + +TL K E++ L L LK+NCI EN A
Sbjct: 667 EHLVEKEREYQNL-LRQTLEQKTQELYHLQLK----LKSNCITENPA 708
>AL732423-1|CAM17479.1| 748|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 748
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 26 KRLSQKDADFLNLFVSKTLHIKKLEMFFLPLGYE*GLKTNCIQENAA 166
+ L +K+ ++ NL + +TL K E++ L L LK+NCI EN A
Sbjct: 627 EHLVEKEREYQNL-LRQTLEQKTQELYHLQLK----LKSNCITENPA 668
>AL732326-2|CAM23143.1| 788|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 788
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 26 KRLSQKDADFLNLFVSKTLHIKKLEMFFLPLGYE*GLKTNCIQENAA 166
+ L +K+ ++ NL + +TL K E++ L L LK+NCI EN A
Sbjct: 667 EHLVEKEREYQNL-LRQTLEQKTQELYHLQLK----LKSNCITENPA 708
>AL732326-1|CAM23142.1| 748|Homo sapiens mitogen-activated protein
kinase kinase kinase 15 protein.
Length = 748
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 26 KRLSQKDADFLNLFVSKTLHIKKLEMFFLPLGYE*GLKTNCIQENAA 166
+ L +K+ ++ NL + +TL K E++ L L LK+NCI EN A
Sbjct: 627 EHLVEKEREYQNL-LRQTLEQKTQELYHLQLK----LKSNCITENPA 668
>AK131477-1|BAD18622.1| 788|Homo sapiens protein ( Homo sapiens
cDNA FLJ16645 fis, clone TESTI4031745, moderately
similar to Mitogen-activated protein kinase kinase
kinase 5 (EC ).
Length = 788
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 26 KRLSQKDADFLNLFVSKTLHIKKLEMFFLPLGYE*GLKTNCIQENAA 166
+ L +K+ ++ NL + +TL K E++ L L LK+NCI EN A
Sbjct: 667 EHLVEKEREYQNL-LRQTLEQKTQELYHLQLK----LKSNCITENPA 708
>AK131412-1|BAD18559.1| 748|Homo sapiens protein ( Homo sapiens
cDNA FLJ16518 fis, clone NT2RI3007443, moderately
similar to MITOGEN-ACTIVATED PROTEIN KINASE KINASE
KINASE 5 (EC ).
Length = 748
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 26 KRLSQKDADFLNLFVSKTLHIKKLEMFFLPLGYE*GLKTNCIQENAA 166
+ L +K+ ++ NL + +TL K E++ L L LK+NCI EN A
Sbjct: 627 EHLVEKEREYQNL-LRQTLEQKTQELYHLQLK----LKSNCITENPA 668
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,739,869
Number of Sequences: 237096
Number of extensions: 1191969
Number of successful extensions: 2355
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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