Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30725
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067212-1|AAC16997.3|  160|Caenorhabditis elegans Hypothetical ...    77   8e-15
Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical pr...    27   4.6  

>AF067212-1|AAC16997.3|  160|Caenorhabditis elegans Hypothetical
           protein F37F2.2 protein.
          Length = 160

 Score = 76.6 bits (180), Expect = 8e-15
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   IYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVE-NKLYSRECSKEML 177
           IYPAY++ KKT  +GR++ + + VENPT  EI DVL A G    +E  K Y R+  ++  
Sbjct: 18  IYPAYIDKKKTAKQGRKISQILAVENPTSVEIHDVLAAVGFNPLLERTKCYPRDGERDFE 77

Query: 178 YRGRIRVQIKNDDG 219
            +GR+RVQ+KNDDG
Sbjct: 78  VQGRVRVQLKNDDG 91


>Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical
           protein W04A4.5 protein.
          Length = 1071

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 312 QADSVLSLALEWIHQYISLRFSSRKFRIYRGTII-ILNLNAYSASVQHFLAAF 157
           Q  S++   L+ IH     R SS + + Y G +I +LN  A+  S+ HF+  F
Sbjct: 633 QVQSIMRSLLD-IHLIFHTRESSIEDQEYVGKLIMVLNAAAFQPSMVHFMPEF 684


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,898,343
Number of Sequences: 27780
Number of extensions: 204194
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)