Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30724
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 35 0.053
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.5
U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 30 2.0
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 2.6
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 2.6
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 6.1
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 6.1
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 28 6.1
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.1 bits (77), Expect = 0.053
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 171 VPIPHPVAVSVPQYVKVPIPQPYPVH 248
VP+P PV V VP V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 120 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYP 242
H P V V ++ VP+P P V P Y VP P P P
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAP 194
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 165 IGVPIPHPVAVSVPQYVKVPIPQPYPV 245
I +P P PV VPQ V VP+P P P+
Sbjct: 7 IPIPAPVPVPAPVPQPVPVPMPMPMPM 33
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 138 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHV 251
P + + P+P PV V +P + +P+P P PV V
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 138 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHV 251
P + + + VP P P V VP + +P+P P PV V
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 171 VPIPHPVAVSVPQYVKVPIPQPYPV 245
+P P P+ + P V P+PQP PV
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPV 25
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 138 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 245
P V V + P+P P+ + +P + +P+P P PV
Sbjct: 10 PAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 177 IPHPVAVSVPQYVKVPIPQPYPVHV 251
+P P+ + +P V VP P P PV V
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPV 25
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 171 VPIPHPVAVSVPQYVKVPIPQPYPVHV 251
VP P PV + +P + +P+P P PV V
Sbjct: 19 VPQPVPVPMPMPMPMPMPMPVPVPVPV 45
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
protein F31C3.3 protein.
Length = 2029
Score = 31.5 bits (68), Expect = 0.66
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 219 VPIPQPYPVHVTWSNLSMYLF 281
+P+P+P+P H W N+S F
Sbjct: 898 IPLPEPFPTHSVWKNMSPIKF 918
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 147 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 245
V V + P+P PV VP+ PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
>U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine
receptor, class r protein10 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 187 GWGIGTPIFFTTVTWYGFVCSVCVW 113
GWG G FF +GFVCS+CV+
Sbjct: 72 GWGEGN--FFGYSALFGFVCSLCVF 94
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 162 KIGVPIPHPVAVSVPQYVKVPIPQPYPV 245
++ P P P V VP PIP P PV
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPV 152
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 162 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTWSNLSMYLFIRLSTKLLXNQY 317
K+ +PI P VS P V PIP P+ L L +S+ L + Y
Sbjct: 554 KLPLPIVTPPVVSTPAPVITPIPAALPISPNSDFLKQQLSTAMSSPALLSLY 605
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 162 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTWSNLSMYLFIRLSTKLLXNQY 317
K+ +PI P VS P V PIP P+ L L +S+ L + Y
Sbjct: 554 KLPLPIVTPPVVSTPAPVITPIPAALPISPNSDFLKQQLSTAMSSPALLSLY 605
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 96 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 230
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +3
Query: 87 PSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPY 239
P+ +++P T + +V + G P+ P + P+ V +P PY
Sbjct: 241 PNSKFKPRPTTSQSNGPVIKTVIVDERGAPMNQPTSTQKPKVVHKFLPNPY 291
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 424 YMDGIGLRDGHLYFFFDLNGIRLLDFIG 341
Y D + + G F FD NG + LDF G
Sbjct: 19 YKDQLLITKGEKQFLFDSNGKKYLDFFG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,366,925
Number of Sequences: 27780
Number of extensions: 330363
Number of successful extensions: 1182
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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