Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30722
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 180 7e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 166 9e-42
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 166 9e-42
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 128 2e-30
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 4e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 4e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 7e-23
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 71 5e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 71 5e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 1e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 1e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 1e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 39 0.002
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.091
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.21
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.37
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.64
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.64
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 0.85
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.1
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.1
AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 28 4.5
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 28 4.5
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 27 6.0
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 6.0
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 27 7.9
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 27 7.9
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 180 bits (437), Expect = 7e-46
Identities = 102/161 (63%), Positives = 109/161 (67%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130
Query: 181 GQTREHALLAFTLGVKQLIVGVNKMIPLNHHTVSPDLRKSRRKYPXTSRRLATTQLLSLS 360
GQTREHALLA TLGVKQL + L T SPD +SRR T Q L
Sbjct: 131 GQTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRRSDTIQRLFHL 173
Query: 361 CPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKL 483
D TETTC C GSRDG + RK L E S +L
Sbjct: 174 SQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPSSRL 214
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 166 bits (403), Expect = 9e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130
Query: 181 GQTREHALLAFTLGVKQLIVGVNKM 255
GQTREHALLA TLGVKQLIV NKM
Sbjct: 131 GQTREHALLAQTLGVKQLIVACNKM 155
Score = 128 bits (310), Expect = 2e-30
Identities = 58/77 (75%), Positives = 64/77 (83%)
Frame = +3
Query: 255 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 434
DSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 156 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215
Query: 435 VERKEGKADGKCLIEAL 485
VERKEG A GK L+EAL
Sbjct: 216 VERKEGNASGKTLLEAL 232
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 166 bits (403), Expect = 9e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKN
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKN 130
Query: 181 GQTREHALLAFTLGVKQLIVGVNKM 255
GQTREHALLA TLGVKQLIV NKM
Sbjct: 131 GQTREHALLAQTLGVKQLIVACNKM 155
Score = 128 bits (310), Expect = 2e-30
Identities = 58/77 (75%), Positives = 64/77 (83%)
Frame = +3
Query: 255 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 434
DSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 156 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 215
Query: 435 VERKEGKADGKCLIEAL 485
VERKEG A GK L+EAL
Sbjct: 216 VERKEGNASGKTLLEAL 232
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 128 bits (310), Expect = 2e-30
Identities = 58/77 (75%), Positives = 64/77 (83%)
Frame = +3
Query: 255 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQ 434
DSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 122 DSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWA 181
Query: 435 VERKEGKADGKCLIEAL 485
VERKEG A GK L+EAL
Sbjct: 182 VERKEGNASGKTLLEAL 198
Score = 99 bits (238), Expect = 9e-22
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 141
ITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 71 ITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (274), Expect = 4e-26
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 234 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENG 293
Query: 181 GQTREHALLAFTLGVKQLIVGVNKM 255
GQT+EHALL +LGV QLIV VNK+
Sbjct: 294 GQTKEHALLLRSLGVTQLIVAVNKL 318
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 273 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 449
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWY--------- 370
Query: 450 GKADGKCLIEALGCHPANCPP 512
DG CL+E + A PP
Sbjct: 371 ---DGPCLLELIDSFVAPQPP 388
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (274), Expect = 4e-26
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G
Sbjct: 252 VTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENG 311
Query: 181 GQTREHALLAFTLGVKQLIVGVNKM 255
GQT+EHALL +LGV QLIV VNK+
Sbjct: 312 GQTKEHALLLRSLGVTQLIVAVNKL 336
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 273 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKE 449
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWY--------- 388
Query: 450 GKADGKCLIEALGCHPANCPP 512
DG CL+E + A PP
Sbjct: 389 ---DGPCLLELIDSFVAPQPP 406
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (247), Expect = 7e-23
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +1
Query: 4 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 183
T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
Query: 184 QTREHALLAFTLGVKQLIVGVNKM 255
QTREH++L T GVK L++ VNKM
Sbjct: 234 QTREHSMLVKTAGVKHLVILVNKM 257
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +3
Query: 243 SKQNDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST--KM 413
+K +D T + E RF+EI+ +++ +++K+G+NP + +VP SG G + + T +
Sbjct: 255 NKMDDPTVK-WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEG 313
Query: 414 PWFKG 428
W+ G
Sbjct: 314 NWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 70.9 bits (166), Expect = 5e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 94 ITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------ 147
Query: 181 GQTREHALLAFTLGVKQLIVGVNK 252
QT+EH +LA +GVK + + +NK
Sbjct: 148 -QTKEHLILAKQVGVKNMAIFINK 170
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 70.9 bits (166), Expect = 5e-13
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 94 ITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------ 147
Query: 181 GQTREHALLAFTLGVKQLIVGVNK 252
QT+EH +LA +GVK + + +NK
Sbjct: 148 -QTKEHLILAKQVGVKNMAIFINK 170
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 98 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 151
Query: 181 GQTREHALLAFTLGV--KQLIVGVNKM 255
QTREH LLA +GV ++V +NK+
Sbjct: 152 -QTREHLLLARQVGVPLDNIVVFMNKV 177
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 152
Query: 181 GQTREHALLAFTLGV--KQLIVGVNKM 255
QTREH LLA +GV ++V +NK+
Sbjct: 153 -QTREHLLLARQVGVPLDNIVVFMNKV 178
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 180
ITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 ITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------ 152
Query: 181 GQTREHALLAFTLGV--KQLIVGVNKM 255
QTREH LLA +GV ++V +NK+
Sbjct: 153 -QTREHLLLARQVGVPLDNIVVFMNKV 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 49 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 228
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 229 QLIVGVNKMIPLNHHTVSPDLRKSRR 306
++I+ +NK +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 177
IT I + E +K VT +D PGH F G AD VL+VAA G E
Sbjct: 189 ITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE----- 243
Query: 178 NGQTREHALLAFTLGVKQLIVGVNKM 255
QT + A V QL+V VNK+
Sbjct: 244 --QTAQSIKFAKDANV-QLVVAVNKI 266
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.091
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 251 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 123
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.21
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 43 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 222
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 223 VKQLIVGVNKM 255
+ Q+I +NK+
Sbjct: 155 I-QIIPVINKI 164
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 46 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 225
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 226 KQLIVGVNKM 255
L++ NK+
Sbjct: 182 NHLMILQNKV 191
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.64
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 7 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 153
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.64
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 7 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 153
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 4 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 153
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 4 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 153
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 55 IIDAPGHRDFIKNMITGTSQADCAVLIV 138
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.1 protein.
Length = 335
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 420 FKGWQVERKEGKADGKCLIEALGCHPANCPP 512
FK WQ +K G G GC P + PP
Sbjct: 154 FKAWQYIQKHGIPTGGSYESQFGCKPYSIPP 184
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 49 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 144
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 231 AHRRSKQNDSTEPPYSEPRFEEIKKEV 311
AHRR K ND + P YS E++ V
Sbjct: 124 AHRRKKHNDLSSPRYSSNSNEDVDGSV 150
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 231 AHRRSKQNDSTEPPYSEPRFEEIKKEV 311
AHRR K ND + P YS E++ V
Sbjct: 186 AHRRKKHNDLSSPRYSSNSNEDVDGSV 212
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 49 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 138
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 49 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 138
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 1 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 153
ITI A + + IID PGH DF + D AVL++ G G
Sbjct: 98 ITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 217 LGVKQLIVGVNKMIPLNHHT-----VSPDLRKSRRKYPXTSRRLATTQLLSLSCPFLDG 378
+G+K VGV + +++ S ++R + P T +++ QLL PF+DG
Sbjct: 1822 IGLKNAPVGVEQQFSVDYTNSGASIASVEVRHGDQTIPITVKKMKPGQLLCTFTPFVDG 1880
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -3
Query: 234 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 76
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 75 VSRSINDGNI 46
S S +D I
Sbjct: 84 FSGSKSDAEI 93
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 223 VKQLIVGVNKMIPLNHHTVSPDLRKSRRKYPXTSRRLATTQLLS 354
V ++ G+N IP+ + P L S+++YP +R + +LL+
Sbjct: 134 VTKVTAGLNGGIPILTTSGMPSLLNSKKEYPFLTRMQGSYRLLA 177
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 223 VKQLIVGVNKMIPLNHHTVSPDLRKSRRKYPXTSRRLATTQLLS 354
V ++ G+N IP+ + P L S+++YP +R + +LL+
Sbjct: 134 VTKVTAGLNGGIPILTTSGMPSLLNSKKEYPFLTRMQGSYRLLA 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,426,182
Number of Sequences: 27780
Number of extensions: 259554
Number of successful extensions: 849
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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