Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30718
         (421 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519...    32   0.22 
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177...    32   0.22 
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815...    28   3.5  
10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373           27   6.1  
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885...    27   8.1  
03_02_0282 + 7074745-7074963,7075050-7075241,7075339-7075932           27   8.1  

>10_08_0799 -
           20650799-20650947,20651022-20651114,20651906-20651934,
           20652039-20652097,20652170-20652283,20652374-20652534,
           20652544-20652663,20652741-20653469,20654980-20655244
          Length = 572

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +2

Query: 62  SMQQEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN---AMSTI 220
           +M    PQ  + +D + + A V+NDP+ L+  LE     +   E +RN   AMS I
Sbjct: 193 NMIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMSNI 248


>03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,
            1772689-1772747,1772816-1772929,1773030-1773238,
            1773347-1774087,1775678-1776238,1776295-1776419,
            1778187-1778317,1779020-1779178,1779471-1779728,
            1780140-1780164,1780531-1780592,1780944-1781003,
            1781112-1781219,1781703-1781838,1781880-1781929,
            1782024-1782096,1782209-1782345,1782441-1782527,
            1782624-1782721,1783259-1783369,1783685-1783769,
            1783880-1783969
          Length = 1259

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +2

Query: 80   PQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN---AMSTI 220
            PQ  E +D + + A V+NDP+ L+  +E     +   E +RN   AMS I
Sbjct: 900  PQMREIVDRNPDLAHVLNDPSILRQTVEAARNPELMREMMRNTDRAMSNI 949


>01_06_0381 +
           28878811-28879120,28880189-28880331,28880753-28881532,
           28882568-28883968
          Length = 877

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 47  LAMQMSMQQEAPQAEESMDVSEEYAEVMNDPAFLQSVLENL 169
           LA ++   ++A  A  + DVS+    ++  P+FL+  +E +
Sbjct: 324 LAARLEKAKDAMMASSTSDVSDTKVVILEPPSFLKRTMEKI 364


>10_02_0085 - 5093036-5094285,5094737-5095255,5098698-5099373
          Length = 814

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 113 PQKHPCSLQPGVLLVACSFALQ 48
           PQKH CS Q G ++V   F L+
Sbjct: 231 PQKHNCSRQCGTIVVPFPFGLE 252


>05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589,
            29288625-29288903,29289047-29289122,29289725-29289787,
            29292116-29292164,29292413-29292504,29293017-29293068,
            29293209-29293271,29293382-29293431,29293941-29294016,
            29294444-29294656,29294763-29294869,29294966-29295074,
            29295489-29295689,29295773-29296033,29296154-29296171,
            29296287-29296397,29296755-29297030,29297108-29297382,
            29297814-29298165,29298371-29298655,29298715-29299261,
            29301658-29301781,29301871-29301946,29302062-29302136,
            29302300-29302353,29302833-29302892,29302977-29303093,
            29303228-29303361,29303480-29303682,29303879-29303976,
            29304358-29304461,29304537-29304702,29304803-29304925,
            29305047-29305129,29305217-29305358,29305523-29305549,
            29305784-29305854,29305930-29306518
          Length = 2046

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 170  EGSPAHSVKMLDHSLLQHIPQKHPCSLQPGVLLVACSFA 54
            E S  H V++LDH   + +        + G  +++CSF+
Sbjct: 960  EESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFS 998


>03_02_0282 + 7074745-7074963,7075050-7075241,7075339-7075932
          Length = 334

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 134 DPAFLQSVLENLPGVDPQSEAIRN 205
           D A+L  + ++ P  DP+S A+RN
Sbjct: 222 DMAYLNELRQSCPASDPESAALRN 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,143,941
Number of Sequences: 37544
Number of extensions: 162769
Number of successful extensions: 417
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)