Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30718
(421 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067211-11|AAK66019.1| 346|Caenorhabditis elegans Proteasome r... 38 0.002
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 1.0
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 28 2.4
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 28 2.4
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 4.1
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 26 9.5
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 26 9.5
>AF067211-11|AAK66019.1| 346|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 10 protein.
Length = 346
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 12/73 (16%)
Frame = +2
Query: 11 DAMELSEEEQIALAMQMSMQQEAPQAE-----ESMDV-------SEEYAEVMNDPAFLQS 154
D ++EE+Q+ A+++SMQ+ AP + E MDV + ++MN+P LQ
Sbjct: 268 DMGAMTEEQQLEWALRLSMQENAPAEQPQVQHEQMDVDGAPAVGGDNLDDLMNNPELLQQ 327
Query: 155 VLENLPGVDPQSE 193
++++LP + + +
Sbjct: 328 IVDDLPAANAEKD 340
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAE-VMNDPAFLQSVLENLPGVDPQSEA 196
E++ + Q+ S+ QE P S+D ++ E V N L+++L NLP DP ++
Sbjct: 3366 EIAPKLQLVSQQLQSVPQEVPA---SLDEQKQLLEDVENQKHNLENLLANLPENDPTADE 3422
Query: 197 IR 202
+R
Sbjct: 3423 LR 3424
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAE-VMNDPAFLQSVLENLPGVDPQSEA 196
E++ + Q+ S+ QE P S+D ++ E V N L+++L NLP DP ++
Sbjct: 4269 EIAPKLQLVSQQLQSVPQEVPA---SLDEQKQLLEDVENQKHNLENLLANLPENDPTADE 4325
Query: 197 IR 202
+R
Sbjct: 4326 LR 4327
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAE-VMNDPAFLQSVLENLPGVDPQSEA 196
E++ + Q+ S+ QE P S+D ++ E V N L+++L NLP DP ++
Sbjct: 5223 EIAPKLQLVSQQLQSVPQEVPA---SLDEQKQLLEDVENQKHNLENLLANLPENDPTADE 5279
Query: 197 IR 202
+R
Sbjct: 5280 LR 5281
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAE-VMNDPAFLQSVLENLPGVDPQSEA 196
E++ + Q+ S+ QE P S+D ++ E V N L+++L NLP DP ++
Sbjct: 6126 EIAPKLQLVSQQLQSVPQEVPA---SLDEQKQLLEDVENQKHNLENLLANLPENDPTADE 6182
Query: 197 IR 202
+R
Sbjct: 6183 LR 6184
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAE-VMNDPAFLQSVLENLPGVDPQSEA 196
E++ + Q+ S+ QE P S+D ++ E V N L+++L NLP DP ++
Sbjct: 7029 EIAPKLQLVSQQLQSVPQEVPA---SLDEQKQLLEDVENQKHNLENLLANLPENDPTADE 7085
Query: 197 IR 202
+R
Sbjct: 7086 LR 7087
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAE-VMNDPAFLQSVLENLPGVDPQSEA 196
E++ + Q+ S+ QE P S+D ++ E V N L+++L NLP DP ++
Sbjct: 7932 EIAPKLQLVSQQLQSVPQEVPA---SLDEQKQLLEDVENQKHNLENLLANLPENDPTADE 7988
Query: 197 IR 202
+R
Sbjct: 7989 LR 7990
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 68 QQEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGV----DPQSEAIRNAMSTI 220
++E EE +++S+E E ++D A ++V+E DP+ +A +N+M I
Sbjct: 597 EEEMDDEEEEIEISDEEEEEIDDEAEEEAVVEEEASEAVEKDPKLKASKNSMDRI 651
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 68 QQEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGV----DPQSEAIRNAMSTI 220
++E EE +++S+E E ++D A ++V+E DP+ +A +N+M I
Sbjct: 597 EEEMDDEEEEIEISDEEEEEIDDEAEEEAVVEEEASEAVEKDPKLKASKNSMDRI 651
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/40 (22%), Positives = 23/40 (57%)
Frame = +2
Query: 8 RDAMELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAEV 127
R ++++S++ Q+ + + P+A E + EE++E+
Sbjct: 721 RQSLDVSQDAQVETEQHIEEAEPEPEAAEETTIEEEHSEL 760
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 8 RDAMELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQ 187
RDA +EE+I +QM+ E + E + E+ + D F QS + + +
Sbjct: 1748 RDAHSDEDEEEIIDPIQMAAALEIRELNEELGRIEQLEKKKTDDLFKQSYSSSSSETESE 1807
Query: 188 SEA 196
S A
Sbjct: 1808 SSA 1810
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 159 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 203
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 159 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 203
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 141 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 185
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 159 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 203
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 159 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 203
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 141 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 185
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +2
Query: 71 QEAPQAEESMDVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRN 205
Q PQ + ++ + E ++NDP ++ +E + + E +RN
Sbjct: 159 QSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRN 203
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 149 VKMLDHSLLQHIPQKHPCSLQPGVLL 72
+ + D L +H+P HP L PGV L
Sbjct: 726 IVVYDKLLTEHLPTAHPEYLSPGVEL 751
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,065,096
Number of Sequences: 27780
Number of extensions: 147874
Number of successful extensions: 411
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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