Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30716
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1017 - 13229717-13229893,13231518-13231748 83 2e-16
07_01_0840 + 6831220-6831438,6831515-6831691 73 3e-13
05_04_0108 - 18046813-18046989,18047331-18047423 69 3e-12
03_05_0205 - 21965782-21965979,21969169-21969417 68 6e-12
11_04_0473 + 18156314-18156388,18157255-18157356,18157714-18157983 44 9e-05
08_02_1499 - 27558872-27559015,27559544-27559666,27560214-275603... 42 5e-04
12_02_0619 - 21276591-21276719,21276798-21276920,21277425-212775... 40 0.001
09_06_0117 - 20953136-20953261,20953621-20953743,20953859-209539... 40 0.001
03_06_0743 - 35906119-35906247,35906747-35906869,35907841-359079... 35 0.069
06_02_0080 + 11518393-11518398,11520318-11520401,11520846-115209... 29 3.4
01_06_0700 - 31317825-31318253 29 3.4
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782... 29 4.5
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 28 6.0
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 28 6.0
01_01_0990 + 7847066-7847478,7847713-7848679 28 6.0
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 28 7.9
06_01_1143 - 9554338-9554983,9555004-9555746 28 7.9
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 28 7.9
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 7.9
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 28 7.9
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 7.9
>03_02_1017 - 13229717-13229893,13231518-13231748
Length = 135
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/73 (52%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +2
Query: 266 EIEERVLKVCKAYDKLS-ASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAE 442
E+ ER++KV + + K+ +++T D+HF NDLGLDSLD VEV+MA+E+EFGFEIPD +A+
Sbjct: 57 EVTERIVKVVRNFQKIDDPAKVTPDAHFKNDLGLDSLDAVEVVMALEEEFGFEIPDNEAD 116
Query: 443 RLVRPKDIVQYIA 481
++ K V +IA
Sbjct: 117 KIDSIKVAVDFIA 129
>07_01_0840 + 6831220-6831438,6831515-6831691
Length = 131
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/73 (43%), Positives = 53/73 (72%)
Frame = +2
Query: 266 EIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAER 445
E+ +R+L V K + K+ S+++ ++HF DLGLDSLD VEV+MA+E+EF EIPD +A++
Sbjct: 54 EVVDRLLDVLKCHPKVDPSKVSPEAHFEKDLGLDSLDTVEVVMAIEEEFKLEIPDQEADK 113
Query: 446 LVRPKDIVQYIAD 484
+ ++Y+A+
Sbjct: 114 IDSLPLAIEYVAN 126
>05_04_0108 - 18046813-18046989,18047331-18047423
Length = 89
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +2
Query: 308 KLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVRPKDIVQYIA 481
+L + +T ++HF DLGLDSLD VE++MA E+EFGFEIPD +AE++ K V ++A
Sbjct: 26 RLPDTLVTPNAHFQKDLGLDSLDTVEIVMAFEEEFGFEIPDNEAEKIDSIKTAVDFVA 83
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 68.1 bits (159), Expect = 6e-12
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +2
Query: 269 IEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERL 448
+ RV+++ K +D++ A ++T + F DL LDSLD VE++MA E EF EIPD A++L
Sbjct: 65 VRARVVELVKKFDRIDADKVTETADFQRDLSLDSLDRVELVMAFEQEFSVEIPDDKADKL 124
Query: 449 VRPKDIVQYI 478
D+ +YI
Sbjct: 125 SCCADVAKYI 134
>11_04_0473 + 18156314-18156388,18157255-18157356,18157714-18157983
Length = 148
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 278 RVLKVCKAYDKLSA-SQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVR 454
+V+++ K L ++L +S F +LG DSLD VE++MA+E+EFG + + +A+ +
Sbjct: 67 KVMQIVKQQLALGEEAKLAPESQF-TELGADSLDTVEIVMALEEEFGITVEEDNAQSITT 125
Query: 455 PKDIVQYI 478
+D I
Sbjct: 126 IQDAADLI 133
>08_02_1499 -
27558872-27559015,27559544-27559666,27560214-27560312,
27561257-27561307
Length = 138
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 272 EERVLKVCKAYDKLSA----SQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 439
+E V KVC K A ++++ S F +DLG DSLD VE++M +E+EF + + A
Sbjct: 53 KETVEKVCDIVKKQLAVPEGTEVSGASKF-SDLGADSLDTVEIVMGLEEEFHISVEESSA 111
Query: 440 ERLVRPKDIVQYI 478
+ + +D I
Sbjct: 112 QSIATVEDAAALI 124
>12_02_0619 -
21276591-21276719,21276798-21276920,21277425-21277535,
21277887-21277901,21279117-21279188
Length = 149
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 263 QEIEERVLKVCKAYDKL-SASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 439
+E ++V + K L + +T +S F ++LG DSLD VE++M +E+EF + + A
Sbjct: 69 KETVDKVCNIVKTQLALPEGTAVTGESKF-SELGADSLDTVEIVMGLEEEFNITVDETSA 127
Query: 440 ERLVRPKDIVQYI 478
+ + +D I
Sbjct: 128 QDIATVQDAANLI 140
>09_06_0117 -
20953136-20953261,20953621-20953743,20953859-20953957,
20955344-20955403
Length = 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +2
Query: 272 EERVLKVCKAYDKL----SASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 439
+E V KVC K + +T S F DLG DSLD VE++M +E+ F + + A
Sbjct: 56 KETVEKVCDIVKKQLVLPEGTDVTGASKF-TDLGADSLDTVEIVMGLEEAFKISVDESSA 114
Query: 440 ERLVRPKDIVQYI 478
+ + +D + I
Sbjct: 115 QSIATVEDAAELI 127
>03_06_0743 -
35906119-35906247,35906747-35906869,35907841-35907954,
35908092-35908148
Length = 140
Score = 34.7 bits (76), Expect = 0.069
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Frame = +2
Query: 272 EERVLKVCKAY-DKLSASQLTV---DSHFMNDLGLDSLDHVEVIMAMEDEFGFEIPDGDA 439
++ + KVC+ ++L+ + T ++ F+ DLG DSLD VE++M +E+ F + + A
Sbjct: 60 QDTIDKVCEIVKNQLAVDEGTAVSGETKFV-DLGADSLDTVEIVMGLEEAFQITVDESSA 118
Query: 440 ERLVRPKD 463
+ + +D
Sbjct: 119 QVIQTVED 126
>06_02_0080 +
11518393-11518398,11520318-11520401,11520846-11520974,
11521362-11521450,11521589-11521772,11522414-11522504,
11522816-11522970,11523190-11523282,11523473-11523565,
11523715-11523795,11523867-11524016,11524134-11524229,
11524489-11524566
Length = 442
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 257 SVQEIEERVLKVCKAYDKLSASQLTVDSHFMNDLGLDSLDHVEVIMAMEDEFGFEI 424
++ ++ ER+L+ CK +K + Q T D+ ++ LG L V+V A+ E G ++
Sbjct: 274 TMDQVRERILQRCKEVEKTAIEQAT-DNAILDQLG--KLVEVDVPRALFQEQGQQL 326
>01_06_0700 - 31317825-31318253
Length = 142
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 136 PLRCSKSSAQLK-PLSKYTKVRPFRMGYHNHIGTRQACSLSFGSGNRGASP 285
PLR S SSA ++ P T R GY+ GTR S G+ +R P
Sbjct: 38 PLRPSSSSAPVRIPAPTTTTFAGARRGYYEDDGTRTDYSAGAGASSRIVPP 88
>06_03_0501 +
21476715-21476785,21477045-21477786,21478097-21478246,
21478350-21478589,21479968-21480048,21480144-21480185,
21480953-21481033,21481271-21481368,21482574-21482667,
21482733-21482861,21483881-21483931,21484023-21484049,
21484280-21484387,21484956-21485201
Length = 719
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 175 LSKYTKVRPFRM----GYHNHIGTRQACSLSFGSGNRGASPESVQGLRQTQC 318
L++Y + F++ G +H+ + +S GSGN G +P+ ++G +C
Sbjct: 566 LNEYDTITAFQVSFVCGTRHHVMNTEHTIISLGSGNMG-NPQQMEGTNYQEC 616
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 271 DFLNRNLDCTPVEYRCDCGTPF*R 200
D+ + C EYRCDCGT F R
Sbjct: 138 DWKAHSKTCGTREYRCDCGTLFSR 161
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 247 CTPVEYRCDCGTPF*R 200
C EYRCDCGT F R
Sbjct: 164 CGTKEYRCDCGTIFSR 179
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 271 DFLNRNLDCTPVEYRCDCGTPF*R 200
D+ + C EYRCDCGT F R
Sbjct: 115 DWKAHSKTCGTREYRCDCGTLFSR 138
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 247 CTPVEYRCDCGTPF*R 200
C EYRCDCGT F R
Sbjct: 159 CGTREYRCDCGTLFTR 174
>06_01_1143 - 9554338-9554983,9555004-9555746
Length = 462
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 284 GLAPRFPEPKLRLHACRVPM*LWYPILKGLTFVYFDSGF 168
G P F E ++HA V + W P +G+ V D+GF
Sbjct: 276 GKRPMFEELTEKVHASAVQIAKWEPPPEGVAKVNIDAGF 314
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 247 CTPVEYRCDCGTPF*R 200
C EYRCDCGT F R
Sbjct: 142 CGTREYRCDCGTLFSR 157
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 247 CTPVEYRCDCGTPF*R 200
C EYRCDCGT F R
Sbjct: 146 CGSREYRCDCGTLFSR 161
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 247 CTPVEYRCDCGTPF*R 200
C EYRCDCGT F R
Sbjct: 194 CGTREYRCDCGTLFSR 209
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 247 CTPVEYRCDCGTPF*R 200
C EYRCDCGT F R
Sbjct: 173 CGTREYRCDCGTLFSR 188
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,880,918
Number of Sequences: 37544
Number of extensions: 320469
Number of successful extensions: 743
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -