Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30712
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 185 3e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 185 3e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 185 3e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 185 3e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 185 3e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 185 3e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 185 3e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 185 3e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 185 3e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 185 3e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 181 5e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 140 1e-33
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 140 1e-33
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 138 3e-33
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 138 3e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 129 2e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 3e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 82 5e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.013
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.013
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.36
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.9
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 29 4.5
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 4.5
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 5.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (344), Expect = 2e-34
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
IVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 138 bits (335), Expect = 3e-33
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (344), Expect = 2e-34
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
IVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 137 bits (331), Expect = 9e-33
Identities = 61/65 (93%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 23 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 82
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 83 TFNTPAMYVAIQAVLSLYASGRTT 106
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 108 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 167
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 168 DIKEKLCYVAL 178
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 191 MVGMGQKDSYVGDEAQSKRGI 253
MVGMGQKDSYVGDEAQSKRGI
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGI 21
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 53 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 112
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 113 TFNTPAMYVAIQAVLSLYASGRTT 136
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 138 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 197
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 198 DIKEKLCYVAL 208
Score = 101 bits (242), Expect = 5e-22
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +2
Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 51
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 185 bits (450), Expect = 3e-47
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYVAIQAVLSLYASGRTT
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTT 150
Score = 142 bits (343), Expect = 3e-34
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 VVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
Query: 690 DIKEKLC*VVL 722
DIKEKLC V L
Sbjct: 212 DIKEKLCYVAL 222
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 181 bits (440), Expect = 5e-46
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
TLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFE
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFE 125
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
TFNTPAMYV IQAVLSLYASGRTT
Sbjct: 126 TFNTPAMYVNIQAVLSLYASGRTT 149
Score = 135 bits (326), Expect = 3e-32
Identities = 62/67 (92%), Positives = 66/67 (98%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
IVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVR
Sbjct: 151 IVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVR 210
Query: 690 DIKEKLC 710
DIKEKLC
Sbjct: 211 DIKEKLC 217
Score = 133 bits (322), Expect = 1e-31
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 65 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 244
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 245 RGI 253
RGI
Sbjct: 62 RGI 64
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKI 315
TLKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 140 bits (338), Expect = 1e-33
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKI 315
TLKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 138 bits (335), Expect = 3e-33
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKI 315
TLKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 138 bits (335), Expect = 3e-33
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 239 SKRGI 253
SKRGI
Sbjct: 61 SKRGI 65
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDM 306
TLKYPIEHGIVTNWDDM
Sbjct: 67 TLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 129 bits (312), Expect = 2e-30
Identities = 55/85 (64%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 432
+++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 433 ETFNTPAMYVAIQAVLSLYASGRTT 507
ETFN PA+Y+ +QAVLSLYA+GRTT
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTT 153
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR
Sbjct: 155 VVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVR 214
Query: 690 DIKEKLC*VVL 722
++KE C + L
Sbjct: 215 EMKENACYLAL 225
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 253
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGL 67
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 103 bits (248), Expect = 1e-22
Identities = 47/84 (55%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE
Sbjct: 70 INYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFE 129
Query: 436 TFNTPAMYVAIQAVLSLYASGRTT 507
+ ++YVA+QAVL+LYA G T
Sbjct: 130 QYGFNSIYVAVQAVLTLYAQGLLT 153
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/67 (59%), Positives = 54/67 (80%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR
Sbjct: 155 VVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVR 214
Query: 690 DIKEKLC 710
+KEKLC
Sbjct: 215 QMKEKLC 221
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIR 256
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 257 PSNTP 271
N P
Sbjct: 69 DINYP 73
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (244), Expect = 3e-22
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +1
Query: 256 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 435
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 436 TFNTPAMYVAIQAVLSLYAS 495
+FN P +Y+A+QAVL+L AS
Sbjct: 140 SFNVPGLYIAVQAVLALTAS 159
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +3
Query: 495 RSYHRIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 674
RS +V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQS 227
Query: 675 REIVRDIKEKLC 710
E+ + IKEK C
Sbjct: 228 YEVAKMIKEKFC 239
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 166
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.8 bits (193), Expect = 5e-16
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +1
Query: 271 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 450
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 451 AMYVAIQAVLSLYASGRT 504
A Y++ VLS +A GRT
Sbjct: 154 AYYLSKNVVLSCFAQGRT 171
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/48 (31%), Positives = 33/48 (68%)
Frame = +3
Query: 504 HRIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 647
H +++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 172 HGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 166
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 268 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 441
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 690 DIKEKLC 710
+ KE LC
Sbjct: 204 ECKEDLC 210
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 268 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 441
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 689
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 690 DIKEKLC 710
+ KE LC
Sbjct: 204 ECKEDLC 210
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -2
Query: 249 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAAT 73
PL++ +SS S TITP +G+PT N S+P P + STT A +
Sbjct: 464 PLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATS 523
Query: 72 SSS 64
++S
Sbjct: 524 TAS 526
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 510 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAERE 680
+V+D G+ V+ VP+ +GY + AI + + + D L L+ Y+F + E+
Sbjct: 324 VVVDIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKL 382
Query: 681 IVR 689
I+R
Sbjct: 383 ILR 385
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +2
Query: 449 PPCTSPSKPCSRCTRPVVPPYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPH 628
PP P P R P PP +R P R PPR P S + P H
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSH 201
Query: 629 E-DPHRARL-LVHYHRRAGNRS*HQG 700
+ RAR +VH G RS QG
Sbjct: 202 DRRALRARRPMVHRPAPYGRRSISQG 227
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 245 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 90
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 245 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 90
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -3
Query: 320 CQIFSMSSQLVTIPC-SMGYLRVGYLFCSVPHLLHKSPSVP-YRPSRPD 180
CQ+FS QLVT+ SMG +++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +2
Query: 320 IIPSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTR 493
I+P MS +SP ++PS + C +T C+ S P + CTR
Sbjct: 155 IVPKRMSSLSPSTSSPSNTENPCSKCPLGSACRNGNCIPLTTSNLCSDGSPPNNTCTR 212
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 490 ASGRTTVSCWTPATVSPTPCPSTR-DTHSPTPSCV 591
AS T VS + A +P P PST +T S TPS V
Sbjct: 211 ASSETRVSIESDAPPNPAPPPSTTPETSSTTPSTV 245
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 415 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTRDTHSPTP 582
+ Q+M F A A S + T S + A+ +PTP PS++ T PTP
Sbjct: 127 LLQVMAMVFQEKCPVFARSAANSATNASATNPSAGSSASSTPTPYPSSQPT-MPTP 181
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya binding
family protein 3 protein.
Length = 751
Score = 28.7 bits (61), Expect = 4.5
Identities = 42/173 (24%), Positives = 63/173 (36%), Gaps = 4/173 (2%)
Frame = +2
Query: 77 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ-GVMVGMGQKDSYVGDEAQSKRGI 253
++L + NGS + + P A FP IVG P + G Q G +
Sbjct: 587 SSLSLKNGSNNSQVNNSIPHFPSAGFPIIVGAPAQTLSALYGYIQN----GQQLLKPAVF 642
Query: 254 RPSNTPSNTESSLTGMTWRRFGIIPSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCS 433
P TPS +E + ++ F P T+ S P +P S +
Sbjct: 643 EPPMTPSPSEINKNRRSFTEFS-TPPTVFFNSTPVISPQKS-----VSDGSPLPAYYNSA 696
Query: 434 KHSTRPPC--TSPSKP-CSRCTRPVVPPYRAGLRRRCLPHRAHLRGIRTPPRH 583
T PP SP+ P S ++P P Y A L +P + H + P +
Sbjct: 697 AFLTPPPTYYGSPNHPTSSNISQPQQPYYGANLYYGFIPPQQHPSAMMRSPNY 749
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +2
Query: 185 GVMVGMGQKDSYVGDEAQSKRGIRPSNTPSNTESSLTG-----MTWRRFGIIPSTMSCVS 349
G G S V D + +N P +TES++TG ++ PSTMS +
Sbjct: 691 GASTVSGSTGSTVSDSSTISDSTGSTNAPGSTESTVTGSSVSTVSGSTGSTGPSTMSAST 750
Query: 350 PPRNTP 367
NTP
Sbjct: 751 GSTNTP 756
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 338 SCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPP--CTSPSKPCSRCTRPVVPP 508
+C PR +PSC C S P C P P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 289 TNWD-DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA--NREKMTQIMFETFNTPAMY 459
T WD D +++ F ++L APE+ ++L NP ++ +++ E ++
Sbjct: 152 TFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLF 211
Query: 460 VAIQAVLSLYASGRTTVSCW 519
+ASG W
Sbjct: 212 TFFDIAYQGFASGDPAADAW 231
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 113 KAGFAGDDAPRAVFPSIVGRPRHQG 187
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 351 PRGTPRPAH*GSP---QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRIVLD 521
P+ T P +P QP Q P+ NI+ A HV PS SY+ + D
Sbjct: 1814 PQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIEEAEHVDAKPSYP---GQSSYNNLEED 1870
Query: 522 SGDGVSHTVPIYEGYALPHA 581
+G +P E ++P A
Sbjct: 1871 HEEGHIAELPALEPVSVPTA 1890
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,693,137
Number of Sequences: 27780
Number of extensions: 463182
Number of successful extensions: 2139
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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