Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30703
(386 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006669-1|AAP35315.1| 185|Homo sapiens signal sequence recepto... 90 2e-18
BC017203-1|AAH17203.1| 185|Homo sapiens signal sequence recepto... 90 2e-18
AF110647-1|AAD48587.1| 185|Homo sapiens translocon-associated p... 90 2e-18
AF087907-1|AAP97205.1| 185|Homo sapiens SSR gamma protein. 90 2e-18
D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein. 31 1.7
AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein. 31 1.7
AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribos... 31 1.7
EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein. 30 3.0
BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein. 30 3.0
BC013199-1|AAH13199.3| 708|Homo sapiens NLRX1 protein protein. 30 3.0
AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein. 30 3.0
AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens ... 30 3.0
AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein. 30 3.0
>BT006669-1|AAP35315.1| 185|Homo sapiens signal sequence receptor,
gamma (translocon-associated protein gamma) protein.
Length = 185
Score = 90.2 bits (214), Expect = 2e-18
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 103 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*APQLF 282
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL WR+ H
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 283 GLSW*RQLAPGCWLLPTDNTKFQLKHRVAVRRED 384
S ++ N KF LKH+VA +RED
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKRED 94
>BC017203-1|AAH17203.1| 185|Homo sapiens signal sequence receptor,
gamma (translocon-associated protein gamma) protein.
Length = 185
Score = 90.2 bits (214), Expect = 2e-18
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 103 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*APQLF 282
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL WR+ H
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 283 GLSW*RQLAPGCWLLPTDNTKFQLKHRVAVRRED 384
S ++ N KF LKH+VA +RED
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKRED 94
>AF110647-1|AAD48587.1| 185|Homo sapiens translocon-associated
protein gamma subunit protein.
Length = 185
Score = 90.2 bits (214), Expect = 2e-18
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 103 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*APQLF 282
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL WR+ H
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 283 GLSW*RQLAPGCWLLPTDNTKFQLKHRVAVRRED 384
S ++ N KF LKH+VA +RED
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKRED 94
>AF087907-1|AAP97205.1| 185|Homo sapiens SSR gamma protein.
Length = 185
Score = 90.2 bits (214), Expect = 2e-18
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = +1
Query: 103 MSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*APQLF 282
M+ K + EE+LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL WR+ H
Sbjct: 1 MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60
Query: 283 GLSW*RQLAPGCWLLPTDNTKFQLKHRVAVRRED 384
S ++ N KF LKH+VA +RED
Sbjct: 61 LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKRED 94
>D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.
Length = 1725
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 123 SFYKRRRVIVARF*PECVHKIVCSLLRERFYC--FSNSNLVVLEGTSL 260
S ++ R++V F P C +C+L++E+ +C S + L GT +
Sbjct: 1078 SLFRNDRLLVYGFIPHCTQATLCALIQEKEFCTMVSTTELQKTTGTMI 1125
>AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 123 SFYKRRRVIVARF*PECVHKIVCSLLRERFYC--FSNSNLVVLEGTSL 260
S ++ R++V F P C +C+L++E+ +C S + L GT +
Sbjct: 1077 SLFRNDRLLVYGFIPHCTQATLCALIQEKEFCTMVSTTELQKTTGTMI 1124
>AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribosyl)
transferase protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 123 SFYKRRRVIVARF*PECVHKIVCSLLRERFYC--FSNSNLVVLEGTSL 260
S ++ R++V F P C +C+L++E+ +C S + L GT +
Sbjct: 1077 SLFRNDRLLVYGFIPHCTQATLCALIQEKEFCTMVSTTELQKTTGTMI 1124
>EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein.
Length = 975
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 LGILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA 126
LGI+ +LPL + LLF +KV +M GK+ +A
Sbjct: 537 LGIMAKLLPLRALPLLFNLIKVVPRVFGRMVGKSREA 573
>BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein.
Length = 975
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 LGILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA 126
LGI+ +LPL + LLF +KV +M GK+ +A
Sbjct: 537 LGIMAKLLPLRALPLLFNLIKVVPRVFGRMVGKSREA 573
>BC013199-1|AAH13199.3| 708|Homo sapiens NLRX1 protein protein.
Length = 708
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 LGILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA 126
LGI+ +LPL + LLF +KV +M GK+ +A
Sbjct: 324 LGIMAKLLPLRALPLLFNLIKVVPRVFGRMVGKSREA 360
>AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein.
Length = 975
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 LGILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA 126
LGI+ +LPL + LLF +KV +M GK+ +A
Sbjct: 537 LGIMAKLLPLRALPLLFNLIKVVPRVFGRMVGKSREA 573
>AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21478 fis, clone COL05012. ).
Length = 554
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 LGILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA 126
LGI+ +LPL + LLF +KV +M GK+ +A
Sbjct: 116 LGIMAKLLPLRALPLLFNLIKVVPRVFGRMVGKSREA 152
>AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein.
Length = 975
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 16 LGILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA 126
LGI+ +LPL + LLF +KV +M GK+ +A
Sbjct: 537 LGIMAKLLPLRALPLLFNLIKVVPRVFGRMVGKSREA 573
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,217,363
Number of Sequences: 237096
Number of extensions: 911489
Number of successful extensions: 1307
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -