Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30703
         (386 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p pro...   107   5e-24
AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA...   107   5e-24
AY118283-1|AAM48312.1| 1527|Drosophila melanogaster AT14886p pro...    27   8.5  
AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-P...    27   8.5  

>AY118492-1|AAM49861.1|  190|Drosophila melanogaster LD05267p
           protein.
          Length = 190

 Score =  107 bits (257), Expect = 5e-24
 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
 Frame = +1

Query: 106 SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*AP 273
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWL WR+H+    P
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWP 62

Query: 274 QLFGLSW*RQLAPGCWLLPT--DNTKFQLKHRVAVRRED 384
               + +    A   +L+ T   N KFQLKH++A RRE+
Sbjct: 63  S--SILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREE 99


>AE014134-1722|AAF52827.1|  190|Drosophila melanogaster CG5885-PA
           protein.
          Length = 190

 Score =  107 bits (257), Expect = 5e-24
 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
 Frame = +1

Query: 106 SGKNNKA----FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*AP 273
           SGK  K     FTKEEELLLQDFSRNVSTKSSALFYGNAFIVSA+PIWL WR+H+    P
Sbjct: 3   SGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWP 62

Query: 274 QLFGLSW*RQLAPGCWLLPT--DNTKFQLKHRVAVRRED 384
               + +    A   +L+ T   N KFQLKH++A RRE+
Sbjct: 63  S--SILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREE 99


>AY118283-1|AAM48312.1| 1527|Drosophila melanogaster AT14886p
           protein.
          Length = 1527

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 142 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWL 240
           +L+  ++  N+S + S L+ G A      P+WL
Sbjct: 362 DLITSNYDTNISVRDSFLYCGLAISRDGAPLWL 394


>AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-PA
           protein.
          Length = 1602

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 142 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWL 240
           +L+  ++  N+S + S L+ G A      P+WL
Sbjct: 437 DLITSNYDTNISVRDSFLYCGLAISRDGAPLWL 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,040,659
Number of Sequences: 53049
Number of extensions: 286413
Number of successful extensions: 612
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)