Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30703
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...    53   6e-08
AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical...    28   2.0  
Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical pr...    27   3.5  
AL132876-8|CAD21660.1|  829|Caenorhabditis elegans Hypothetical ...    27   4.6  
Z74028-8|CAJ55251.1|  318|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z74028-7|CAA98426.2|  341|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF047660-9|AAC04433.3|  339|Caenorhabditis elegans Hypothetical ...    26   8.1  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score = 53.2 bits (122), Expect = 6e-08
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +1

Query: 130 TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLXWRVHHWK*APQLFGLSW*RQLA 309
           TKEEELLL  +S   STK +  FY NA I+S  P++L + VH  +    L  + W     
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSL--VVWGLSAV 62

Query: 310 PGCWL--LPTDNTKFQLKHRVAVRR 378
              +L  L   N K  LKH++ ++R
Sbjct: 63  GTAYLLSLACKNQKCLLKHQIVMKR 87


>AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical
           protein Y57A10A.27 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +1

Query: 70  FVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSAL 195
           F+KV +T L +    + K+  K  ELL++   R  STK+SAL
Sbjct: 10  FLKVDLTRLAEDDETHQKSTKKHTELLIELIDRK-STKASAL 50


>Z48795-5|CAA88729.1|  337|Caenorhabditis elegans Hypothetical
           protein R05H5.6 protein.
          Length = 337

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +1

Query: 34  VLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA--FTKEEELLLQDFSRNVS 177
           +L +NS  L+F +  VK+  ++K   +N+ +  +  EE ++   FS  +S
Sbjct: 188 LLAINSVNLVFNYFLVKINTILKEKWRNSLSTRYQMEENIITTKFSTFIS 237


>AL132876-8|CAD21660.1|  829|Caenorhabditis elegans Hypothetical
           protein Y105E8A.9 protein.
          Length = 829

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +1

Query: 70  FVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAI 228
           F++VK+  L+++ GK++   T+E   +L   + N  T  +    GNA +   +
Sbjct: 266 FLQVKILRLLRVLGKDDVRVTEEMNDILAQVATNTETAKNV---GNAILYETV 315


>Z74028-8|CAJ55251.1|  318|Caenorhabditis elegans Hypothetical
           protein C14C10.2b protein.
          Length = 318

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 94  LVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYG 204
           L+K++GK+ K    EE +     +R VS    ++ YG
Sbjct: 255 LIKLAGKSGKTENLEELMWKVKANREVSDNQKSILYG 291


>Z74028-7|CAA98426.2|  341|Caenorhabditis elegans Hypothetical
           protein C14C10.2a protein.
          Length = 341

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 94  LVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYG 204
           L+K++GK+ K    EE +     +R VS    ++ YG
Sbjct: 278 LIKLAGKSGKTENLEELMWKVKANREVSDNQKSILYG 314


>AF047660-9|AAC04433.3|  339|Caenorhabditis elegans Hypothetical
           protein T09A12.1 protein.
          Length = 339

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +1

Query: 67  VFVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAI 228
           +++  +V  LVKM    +K  +KE++ +L+ + R+   K        A  VS +
Sbjct: 208 IYLSARVLQLVKMESLISKEVSKEDQEILRGYCRSNDHKDKVEPIFEAIAVSIL 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,278,523
Number of Sequences: 27780
Number of extensions: 150304
Number of successful extensions: 304
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)