Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30702
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109028-1|AAI09029.1|  783|Homo sapiens ring finger protein 43 ...    30   8.0  
AK000322-1|BAA91085.1|  783|Homo sapiens protein ( Homo sapiens ...    30   8.0  
AB081837-1|BAD51435.1|  783|Homo sapiens urcc protein.                 30   8.0  

>BC109028-1|AAI09029.1|  783|Homo sapiens ring finger protein 43
           protein.
          Length = 783

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 368 PSYNTNEAFMWCIEAAALLC--TGNGNILIPHEP*PIYNN 481
           P Y  + A+ W  EA  L+C   G    L+P  P P Y+N
Sbjct: 682 PHYTPSVAYPWSPEAHPLICGPPGLDKRLLPETPGPCYSN 721


>AK000322-1|BAA91085.1|  783|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20315 fis, clone HEP07873. ).
          Length = 783

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 368 PSYNTNEAFMWCIEAAALLC--TGNGNILIPHEP*PIYNN 481
           P Y  + A+ W  EA  L+C   G    L+P  P P Y+N
Sbjct: 682 PHYTPSVAYPWSPEAHPLICGPPGLDKRLLPETPGPCYSN 721


>AB081837-1|BAD51435.1|  783|Homo sapiens urcc protein.
          Length = 783

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 368 PSYNTNEAFMWCIEAAALLC--TGNGNILIPHEP*PIYNN 481
           P Y  + A+ W  EA  L+C   G    L+P  P P Y+N
Sbjct: 682 PHYTPSVAYPWSPEAHPLICGPPGLDKRLLPETPGPCYSN 721


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,449,590
Number of Sequences: 237096
Number of extensions: 1496189
Number of successful extensions: 1779
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)