Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30702
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1118|AAF50661.2|  632|Drosophila melanogaster CG8270-PA...    32   0.57 
AY118622-1|AAM49991.1|  232|Drosophila melanogaster RE09848p pro...    29   5.4  
AY058694-1|AAL13923.1|  386|Drosophila melanogaster LD41384p pro...    29   5.4  
AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p pro...    29   5.4  
AJ006219-1|CAA06918.1|  426|Drosophila melanogaster clathrin-ass...    29   5.4  
AF192794-1|AAF17486.1|  386|Drosophila melanogaster makorin 1 pr...    29   5.4  
AF192788-1|AAF17491.1|  386|Drosophila melanogaster makorin 1 pr...    29   5.4  
AF110231-1|AAF14247.1|  426|Drosophila melanogaster clathrin-ass...    29   5.4  
AE014298-2424|AAF48624.1|  232|Drosophila melanogaster CG13014-P...    29   5.4  
AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA ...    29   5.4  
AE014296-3567|AAN12178.1|  386|Drosophila melanogaster CG7184-PB...    29   5.4  
AE014296-3566|AAF51740.2|  386|Drosophila melanogaster CG7184-PA...    29   5.4  

>AE014296-1118|AAF50661.2|  632|Drosophila melanogaster CG8270-PA
           protein.
          Length = 632

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 392 FMWCIEA-AALLCTGNGNILIP 454
           F WC +A  ALLCT  GN LIP
Sbjct: 161 FAWCCDANVALLCTSEGNSLIP 182


>AY118622-1|AAM49991.1|  232|Drosophila melanogaster RE09848p
           protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 369 PHTIQMRLLCGVSRRRHCCVRATVTF*YLTNRDPFTTIFAYDNIDLTRISFIVFALII 542
           P  +Q RLLC  SRR  C +  T+    L   +P T +  +   D  R++F +++ ++
Sbjct: 72  PGAVQ-RLLCDKSRRYSCVLFVTLVVGELQTVNPATRMGDFFGADWERLAFGLWSAVL 128


>AY058694-1|AAL13923.1|  386|Drosophila melanogaster LD41384p
           protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 289 KCIYSCR-IKYYPNKIARACPLCKV 360
           +CI + R  K + NKI RACP C+V
Sbjct: 244 ECIRTWRQAKQFENKITRACPECRV 268


>AY058621-1|AAL13850.1|  426|Drosophila melanogaster LD31377p
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 356 RLELPSYNTNEAFMWCIEAAALLCTGNGNIL 448
           R E   Y  NE F+  IE+  LL   NGN+L
Sbjct: 162 RSEGIKYRKNEVFLDVIESVNLLANANGNVL 192


>AJ006219-1|CAA06918.1|  426|Drosophila melanogaster
           clathrin-associated protein protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 356 RLELPSYNTNEAFMWCIEAAALLCTGNGNIL 448
           R E   Y  NE F+  IE+  LL   NGN+L
Sbjct: 162 RSEGIKYRKNEVFLDVIESVNLLANANGNVL 192


>AF192794-1|AAF17486.1|  386|Drosophila melanogaster makorin 1
           protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 289 KCIYSCR-IKYYPNKIARACPLCKV 360
           +CI + R  K + NKI RACP C+V
Sbjct: 244 ECIRTWRQAKQFENKITRACPECRV 268


>AF192788-1|AAF17491.1|  386|Drosophila melanogaster makorin 1
           protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 289 KCIYSCR-IKYYPNKIARACPLCKV 360
           +CI + R  K + NKI RACP C+V
Sbjct: 244 ECIRTWRQAKQFENKITRACPECRV 268


>AF110231-1|AAF14247.1|  426|Drosophila melanogaster
           clathrin-associated adaptor complexAP-1 medium chain
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 356 RLELPSYNTNEAFMWCIEAAALLCTGNGNIL 448
           R E   Y  NE F+  IE+  LL   NGN+L
Sbjct: 162 RSEGIKYRKNEVFLDVIESVNLLANANGNVL 192


>AE014298-2424|AAF48624.1|  232|Drosophila melanogaster CG13014-PA
           protein.
          Length = 232

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 369 PHTIQMRLLCGVSRRRHCCVRATVTF*YLTNRDPFTTIFAYDNIDLTRISFIVFALII 542
           P  +Q RLLC  SRR  C +  T+    L   +P T +  +   D  R++F +++ ++
Sbjct: 72  PGAVQ-RLLCDKSRRYSCVLFVTLVVGELQTVNPATRMGDFFGADWERLAFGLWSAVL 128


>AE014297-967|AAF54399.1|  426|Drosophila melanogaster CG9388-PA
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 356 RLELPSYNTNEAFMWCIEAAALLCTGNGNIL 448
           R E   Y  NE F+  IE+  LL   NGN+L
Sbjct: 162 RSEGIKYRKNEVFLDVIESVNLLANANGNVL 192


>AE014296-3567|AAN12178.1|  386|Drosophila melanogaster CG7184-PB,
           isoform B protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 289 KCIYSCR-IKYYPNKIARACPLCKV 360
           +CI + R  K + NKI RACP C+V
Sbjct: 244 ECIRTWRQAKQFENKITRACPECRV 268


>AE014296-3566|AAF51740.2|  386|Drosophila melanogaster CG7184-PA,
           isoform A protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 289 KCIYSCR-IKYYPNKIARACPLCKV 360
           +CI + R  K + NKI RACP C+V
Sbjct: 244 ECIRTWRQAKQFENKITRACPECRV 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,495,782
Number of Sequences: 53049
Number of extensions: 457471
Number of successful extensions: 683
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)