Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30700
(477 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 168 4e-42
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 168 4e-42
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 168 4e-42
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 168 4e-42
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 168 4e-42
BT025914-1|ABG02158.1| 196|Drosophila melanogaster IP08472p pro... 27 9.9
BT016040-1|AAV36925.1| 671|Drosophila melanogaster LP22276p pro... 27 9.9
AY122202-1|AAM52714.1| 585|Drosophila melanogaster LD47517p pro... 27 9.9
AE014298-1060|AAN09214.1| 177|Drosophila melanogaster CG32718-P... 27 9.9
AE014297-323|AAN13256.1| 639|Drosophila melanogaster CG2182-PB,... 27 9.9
AE014297-322|AAF51975.3| 671|Drosophila melanogaster CG2182-PA,... 27 9.9
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 168 bits (408), Expect = 4e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 YHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMI 182
YHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMI
Sbjct: 285 YHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMI 344
Query: 183 KGCCMGPKKRIITLRKSLRVHTKR 254
KGCC+G KKRIITLRKSL HTKR
Sbjct: 345 KGCCIGSKKRIITLRKSLLKHTKR 368
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 248 KEAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 382
K +ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 367 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 168 bits (408), Expect = 4e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 YHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMI 182
YHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMI
Sbjct: 274 YHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMI 333
Query: 183 KGCCMGPKKRIITLRKSLRVHTKR 254
KGCC+G KKRIITLRKSL HTKR
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKR 357
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 248 KEAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 382
K +ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 168 bits (408), Expect = 4e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 YHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMI 182
YHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMI
Sbjct: 261 YHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMI 320
Query: 183 KGCCMGPKKRIITLRKSLRVHTKR 254
KGCC+G KKRIITLRKSL HTKR
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKR 344
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 248 KEAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 382
K +ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 168 bits (408), Expect = 4e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 YHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMI 182
YHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMI
Sbjct: 261 YHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMI 320
Query: 183 KGCCMGPKKRIITLRKSLRVHTKR 254
KGCC+G KKRIITLRKSL HTKR
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKR 344
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 248 KEAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 382
K +ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 168 bits (408), Expect = 4e-42
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +3
Query: 3 YHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMI 182
YHHRTE+NKKIYRIG GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMI
Sbjct: 274 YHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMI 333
Query: 183 KGCCMGPKKRIITLRKSLRVHTKR 254
KGCC+G KKRIITLRKSL HTKR
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKR 357
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +2
Query: 248 KEAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 382
K +ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
>BT025914-1|ABG02158.1| 196|Drosophila melanogaster IP08472p
protein.
Length = 196
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 251 LCMHTQRLSKSNDTLFRSHAATLDH 177
LC H S+D LF SH + LDH
Sbjct: 92 LCNHDVHDEDSDDLLFYSHQSQLDH 116
>BT016040-1|AAV36925.1| 671|Drosophila melanogaster LP22276p
protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 251 LCMHTQRLSKSNDTLFRSHAATLDH 177
LC H S+D LF SH + LDH
Sbjct: 567 LCNHDVHDEDSDDLLFYSHQSQLDH 591
>AY122202-1|AAM52714.1| 585|Drosophila melanogaster LD47517p
protein.
Length = 585
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 251 LCMHTQRLSKSNDTLFRSHAATLDH 177
LC H S+D LF SH + LDH
Sbjct: 481 LCNHDVHDEDSDDLLFYSHQSQLDH 505
>AE014298-1060|AAN09214.1| 177|Drosophila melanogaster CG32718-PA
protein.
Length = 177
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 199 PMQQPLIITKSLFTSP*WGKPPIGV 125
P+ PL I LF + WGKP +GV
Sbjct: 9 PIWTPLFILFLLFLAGVWGKPSLGV 33
>AE014297-323|AAN13256.1| 639|Drosophila melanogaster CG2182-PB,
isoform B protein.
Length = 639
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 251 LCMHTQRLSKSNDTLFRSHAATLDH 177
LC H S+D LF SH + LDH
Sbjct: 535 LCNHDVHDEDSDDLLFYSHQSQLDH 559
>AE014297-322|AAF51975.3| 671|Drosophila melanogaster CG2182-PA,
isoform A protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 251 LCMHTQRLSKSNDTLFRSHAATLDH 177
LC H S+D LF SH + LDH
Sbjct: 567 LCNHDVHDEDSDDLLFYSHQSQLDH 591
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,636,449
Number of Sequences: 53049
Number of extensions: 448970
Number of successful extensions: 1344
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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