BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30695
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.79
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 1.8
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 2.4
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 2.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 2.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 2.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.4
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 7.4
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 21 9.7
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.7
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 21 9.7
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.0 bits (52), Expect = 0.79
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 743 KINKLGVPRTFPRKVPPDA 687
++ +G P +FPR +PP+A
Sbjct: 374 RLRYIGPPTSFPRFIPPNA 392
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P +FPR +PP+A
Sbjct: 378 IGPPTSFPRFIPPNA 392
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P +FPR +PP+A
Sbjct: 378 IGPPTSFPRFIPPNA 392
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P +FPR +PP+A
Sbjct: 378 IGPPTSFPRFIPPNA 392
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P +FPR +PP+A
Sbjct: 367 IGPPTSFPRFIPPNA 381
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 743 KINKLGVPRTFPRKVPPDA 687
+ +G P FPR +PP+A
Sbjct: 372 RFRHIGPPTPFPRFIPPNA 390
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 149 IGPPTPFPRFIPPNA 163
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 149 IGPPTPFPRFIPPNA 163
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 149 IGPPTPFPRFIPPNA 163
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 155 IGPPTPFPRFIPPNA 169
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 150 IGPPTPFPRFIPPNA 164
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 150 IGPPTPFPRFIPPNA 164
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 145 IGPPTPFPRFIPPNA 159
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 145 IGPPTPFPRFIPPNA 159
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 145 IGPPTPFPRFIPPNA 159
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 145 IGPPTPFPRFIPPNA 159
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 156 IGPPTPFPRFIPPNA 170
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 156 IGPPTPFPRFIPPNA 170
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 159 IGPPTPFPRFIPPNA 173
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 149 IGPPTPFPRFIPPNA 163
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 154 IGPPTPFPRFIPPNA 168
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 154 IGPPTPFPRFIPPNA 168
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 154 IGPPTPFPRFIPPNA 168
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 151 IGPPTPFPRFIPPNA 165
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 161 IGPPTPFPRFIPPNA 175
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 370 IGPPTPFPRFIPPNA 384
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 376 IGPPTPFPRFIPPNA 390
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 396 IGPPTPFPRFIPPNA 410
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 366 IGPPTPFPRFIPPNA 380
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 377 IGPPTPFPRFIPPNA 391
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 377 IGPPTPFPRFIPPNA 391
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 366 IGPPTPFPRFIPPNA 380
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 384 IGPPTPFPRFIPPNA 398
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 388 IGPPTPFPRFIPPNA 402
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 731 LGVPRTFPRKVPPDA 687
+G P FPR +PP+A
Sbjct: 398 IGPPTPFPRFIPPNA 412
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 109 SHDVVKRRPVNCNTTHYRANWVPGPPSRSTVSIS 8
S + K++P +C+T YR V P V ++
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTPLFTPAVGVA 593
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 731 LGVPRTFPRKVPPD 690
+G P FPR +PP+
Sbjct: 370 IGPPTPFPRFIPPN 383
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 140 ALQHIPLSPAGVIAKRPAPIALPNSC 217
AL P P G K AP+ L +C
Sbjct: 55 ALGEAPCDPVGRRLKSLAPLVLRGAC 80
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 414 ESTFFNSGLLFQTGTTLNPI 355
E + SG L+ TT+NPI
Sbjct: 307 EWLYILSGCLYYFSTTINPI 326
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -2
Query: 743 KINKLGVPRTFPRKVPPDA 687
+ +G +FPR +PP+A
Sbjct: 374 RFRHIGPSTSFPRFIPPNA 392
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 21.4 bits (43), Expect = 9.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 140 ALQHIPLSPAGVIAKRPAPIALPNSC 217
AL P P G K AP+ L +C
Sbjct: 55 ALGEAPCDPVGRRLKSLAPLVLRGAC 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,500
Number of Sequences: 438
Number of extensions: 4821
Number of successful extensions: 78
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -