Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30686
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    27   0.61 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   1.9  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.9  

>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 243 LSAHWLLEPIDNYSVNAPPTLRYKF*GLKYSYNGCPALQTEAHYCFTAEIG 395
           L+ +++ +P D Y+VN   T   +   L+ +   C  L  E+  C+    G
Sbjct: 94  LARYFVTDPADAYNVNRTETCLQELPALELNAEKCCGLAFESFLCYYYNYG 144


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 369  HYCFTAEIGRAVVPTRADSQEVLP-PVN 449
            H  F AEIG ++V    DS E+LP P N
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLPAPAN 966


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +1

Query: 397 GRWYLPARTHKRSYHQLMLS*VDNV*FSINRVSF--CCIVGNLFVIILYL 540
           GRW L   TH++S  +        V  +   VS+   C+V N   ++L +
Sbjct: 791 GRWVLDKETHRKSVQRAHRPGALRVASAFQTVSYDAACVVANTTPLVLLM 840


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,679
Number of Sequences: 2352
Number of extensions: 13413
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)