Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30686
         (741 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L39060-1|AAA62862.1|  450|Homo sapiens transcription factor SL1 ...    32   1.9  
BC047051-1|AAH47051.1|  498|Homo sapiens KIFC3 protein protein.        32   1.9  
BC034234-1|AAH34234.1|  687|Homo sapiens KIFC3 protein protein.        32   1.9  
BC013808-1|AAH13808.1|  450|Homo sapiens TATA box binding protei...    32   1.9  
BC008014-1|AAH08014.1|  553|Homo sapiens Similar to kinesin fami...    32   1.9  
BC001211-1|AAH01211.2|  833|Homo sapiens kinesin family member C...    32   1.9  
AL592148-5|CAI40467.1|  450|Homo sapiens TATA box binding protei...    32   1.9  
AF004426-1|AAC24153.1|  687|Homo sapiens microtubule-based motor...    32   1.9  
AB209290-1|BAD92527.1|  870|Homo sapiens Kinesin-like protein KI...    32   1.9  

>L39060-1|AAA62862.1|  450|Homo sapiens transcription factor SL1
           protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 204 KKYKTNRFIFKLTKILAFYHTKYTQNTKRGYKGNLLNENLRLYLHISLQHII 49
           K+      I+KL   + FYH K    +   +   + N  +  YL ISLQH +
Sbjct: 91  KRQAAPEIIWKLGSEILFYHPKSNMESFNTFANRMKNIGVMNYLKISLQHAL 142


>BC047051-1|AAH47051.1|  498|Homo sapiens KIFC3 protein protein.
          Length = 498

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 TLRYKF*GLKYSYNGCPALQTEAHYCFTAEIGRAVVPTRADSQEVL 437
           TL   + GLK    G P L  EA     AEIG+A+    +++QE+L
Sbjct: 238 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 283


>BC034234-1|AAH34234.1|  687|Homo sapiens KIFC3 protein protein.
          Length = 687

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 TLRYKF*GLKYSYNGCPALQTEAHYCFTAEIGRAVVPTRADSQEVL 437
           TL   + GLK    G P L  EA     AEIG+A+    +++QE+L
Sbjct: 238 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 283


>BC013808-1|AAH13808.1|  450|Homo sapiens TATA box binding protein
           (TBP)-associated factor, RNA polymerase I, A, 48kDa
           protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 204 KKYKTNRFIFKLTKILAFYHTKYTQNTKRGYKGNLLNENLRLYLHISLQHII 49
           K+      I+KL   + FYH K    +   +   + N  +  YL ISLQH +
Sbjct: 91  KRQAAPEIIWKLGSEILFYHPKSNMESFNTFANRMKNIGVMNYLKISLQHAL 142


>BC008014-1|AAH08014.1|  553|Homo sapiens Similar to kinesin family
           member C3 protein.
          Length = 553

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 TLRYKF*GLKYSYNGCPALQTEAHYCFTAEIGRAVVPTRADSQEVL 437
           TL   + GLK    G P L  EA     AEIG+A+    +++QE+L
Sbjct: 97  TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 142


>BC001211-1|AAH01211.2|  833|Homo sapiens kinesin family member C3
           protein.
          Length = 833

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 TLRYKF*GLKYSYNGCPALQTEAHYCFTAEIGRAVVPTRADSQEVL 437
           TL   + GLK    G P L  EA     AEIG+A+    +++QE+L
Sbjct: 377 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 422


>AL592148-5|CAI40467.1|  450|Homo sapiens TATA box binding protein
           (TBP)-associated factor,ember 6 protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 204 KKYKTNRFIFKLTKILAFYHTKYTQNTKRGYKGNLLNENLRLYLHISLQHII 49
           K+      I+KL   + FYH K    +   +   + N  +  YL ISLQH +
Sbjct: 91  KRQAAPEIIWKLGSEILFYHPKSNMESFNTFANRMKNIGVMNYLKISLQHAL 142


>AF004426-1|AAC24153.1|  687|Homo sapiens microtubule-based motor
           protein.
          Length = 687

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 TLRYKF*GLKYSYNGCPALQTEAHYCFTAEIGRAVVPTRADSQEVL 437
           TL   + GLK    G P L  EA     AEIG+A+    +++QE+L
Sbjct: 238 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 283


>AB209290-1|BAD92527.1|  870|Homo sapiens Kinesin-like protein KIFC3
           variant protein.
          Length = 870

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 TLRYKF*GLKYSYNGCPALQTEAHYCFTAEIGRAVVPTRADSQEVL 437
           TL   + GLK    G P L  EA     AEIG+A+    +++QE+L
Sbjct: 421 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,141,317
Number of Sequences: 237096
Number of extensions: 1763640
Number of successful extensions: 2543
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2543
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)