Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30686
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.56 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.0  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.3  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   7.0  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   9.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.2  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 155 ASILVSLKIKRLVLYFFYYNL 217
           +S+ +SL I  L+LYF Y+ +
Sbjct: 12  SSVFLSLLIPALILYFIYFRI 32


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 158 SILVSLKIKRLVLYFFYYNLFIA 226
           S L S  I  +++ F YYN+F A
Sbjct: 347 SSLSSFYIPCIIMVFLYYNIFKA 369


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 593 LNGFISNLLFLFH*FKYFEYNY 658
           L  F +N+  + + +KYF+YN+
Sbjct: 24  LRDFKANIFQVKYQWKYFDYNF 45


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +1

Query: 694 LTVVIKLVLINVNY 735
           L+VVI +V++NV+Y
Sbjct: 311 LSVVITIVILNVHY 324


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 105 FLYTLSLYFVCISY 146
           F+Y   L FVC++Y
Sbjct: 373 FIYASLLEFVCVNY 386


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 105 FLYTLSLYFVCISY 146
           F+Y   L FVC++Y
Sbjct: 342 FIYASLLEFVCVNY 355


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 105 FLYTLSLYFVCISY 146
           F+Y   L FVC++Y
Sbjct: 393 FIYASLLEFVCVNY 406


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 105 FLYTLSLYFVCISY 146
           F+Y   L FVC++Y
Sbjct: 342 FIYASLLEFVCVNY 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,317
Number of Sequences: 438
Number of extensions: 3883
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)