Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30685
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 34 0.13
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 33 0.17
04_03_0128 - 11530618-11530838,11532683-11532809,11533746-115338... 33 0.30
06_01_0920 + 7098007-7098065,7098538-7099345 31 0.90
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 31 1.2
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 31 1.2
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 30 2.1
01_07_0261 + 42369666-42369808,42369946-42370108,42370453-423705... 29 2.8
01_04_0068 + 15693131-15693533,15693604-15693803,15693879-156941... 29 2.8
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 29 3.6
12_02_0628 + 21357876-21359921 29 4.8
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 29 4.8
03_05_0267 - 22538631-22539452 29 4.8
11_06_0610 - 25449085-25453284 28 6.4
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 28 6.4
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 28 6.4
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135... 28 8.4
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 28 8.4
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 6 SPRPSTSPLRQVPNEEHTKSEEPRQLRT-PSPVKKITSTKEFSADFIMSEREQEVLNKVQ 182
SPR + P R+V + P + RT PSP++ T + R +
Sbjct: 266 SPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRH-GGTPSRRPGSPIRRRSPSPPPRRL 324
Query: 183 KSLRKLSPERKSVSPIREKSP 245
+S R LSP R SPIR +SP
Sbjct: 325 RSPRHLSPRRDRGSPIRRRSP 345
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 365 KAKEQKIPCKPSSRNVSPTKKSNIPGPSKAEKTPDSPTKSRSISPKXPFLKDLDPHKYLK 544
+AKE+ P KP + KS+ G K ++ SPTK+++++ + +K K K
Sbjct: 99 EAKEKPSPKKPKTLGAKSDTKSSAEGVEKEKRRSPSPTKAKALASESQDIKKPSSPKKTK 158
Query: 545 SV 550
++
Sbjct: 159 AL 160
>04_03_0128 -
11530618-11530838,11532683-11532809,11533746-11533892,
11533981-11534082,11534207-11534332,11535507-11535584,
11535780-11535827,11536005-11536193
Length = 345
Score = 32.7 bits (71), Expect = 0.30
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 248 ENASLHDLDIIQVKETVKSIDGYEIIDETEVFDSNVKTDKAKEQKIPCKPSSRNVSPTKK 427
+N+SL + + + + KS DG + D+ S VK +K K +K CK T K
Sbjct: 255 KNSSLTEKSLSDEESSYKSEDG-DSSDDLSDSSSEVKKNKGKLEKTTCKTKKSVSFNTAK 313
Query: 428 SNIPGPSK--AEKTP-DSPTKSRSIS 496
+ PSK E+ P D K S S
Sbjct: 314 RPVGRPSKRSTEEMPRDVEIKQESAS 339
>06_01_0920 + 7098007-7098065,7098538-7099345
Length = 288
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 242 SLENASLHDLDIIQVKETVKSIDGYEIIDETEVFDSNVKTDKAKEQKIPCKPSSRNVSPT 421
S+ + LHD + +Q+ +T Y ++ V S + +AK Q+ P P S +S
Sbjct: 99 SVLHLPLHDSEFLQISQTCNCNYIYMTLNFIRVLASLTEMLRAKNQE-PSPPPSPLLSGV 157
Query: 422 KK-SNIPGPSKAEKTPDSPTKSRSISPK 502
++ S +P P +P K + PK
Sbjct: 158 QEPSRVPAPPPDLDKDKAPPKPKPPKPK 185
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 413 SPTKKSNIPGPSKAEKTPDSPTKSRSISPKXPFLKDLDPHKYLKSVML-SQKR 568
SPTK+ P P + +P +P + IS P D D K++ S S+KR
Sbjct: 619 SPTKQHAPPAPPSVQTSPPTPQSALLISTYDPKEIDKDKEKFMFSAFRNSEKR 671
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 18 STSPLRQVPNEEHTKSEEPRQLRTPSPVKKITSTKEFSAD 137
S S LR +P ++ ++E +Q+RTP P K+ E+S D
Sbjct: 1053 SASHLRAMPPKQKAEAEAKKQIRTPKPPKQAV---EYSCD 1089
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 48 EEHTKSEEPRQLRTPSPVKKIT---STKEFSADFIMSEREQEVLNKVQKSLRKLSPERKS 218
+ + SE RQL+ SP KKI+ S K F +E L+ +++L+K S +
Sbjct: 163 DAYVSSEVRRQLKPRSPEKKISIDPSVKNFFRGMSAPAKEAIKLSDYERTLKKASSGKSK 222
Query: 219 VSPIREKSPSK 251
P + P++
Sbjct: 223 PVPQLGEQPNQ 233
>01_07_0261 +
42369666-42369808,42369946-42370108,42370453-42370585,
42370923-42371093,42371211-42371289,42371620-42371686,
42372231-42372330,42372643-42372719,42373201-42373293,
42373391-42373564
Length = 399
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 3 RSPRPSTSPLRQVPNEEHTKSEEPRQLRTPSP---VKKITSTK 122
R+P PS++ + PNE+ + S+ ++ PSP VKK+ K
Sbjct: 19 RAPPPSSAAAKPEPNEKASNSKPASPVQAPSPERTVKKLRLAK 61
>01_04_0068 +
15693131-15693533,15693604-15693803,15693879-15694162,
15694251-15694428
Length = 354
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 15 PSTSPLRQVPNEEHTKSEEPRQLRTPSPVKKI---TSTKEFSADFIMSEREQEVLNKVQK 185
PS++ NEE + E RQL+ SP KKI S K F + +E L+ +
Sbjct: 120 PSSTACPHKGNEEGER-EVKRQLKPRSPEKKIPIDPSVKNFFKGMSTTNKEALKLSDYDR 178
Query: 186 SLRKLSPERKSVSPIREKSPSKML 257
+L+K ++ P + P++ L
Sbjct: 179 TLQKAYHKKSKPVPQLGEQPNQEL 202
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 60 KSEEPRQLRTPSPVKKITSTKEFSADFIMSEREQEVLNKVQKSLRKLSPERKSVSPIREK 239
K++ + + P P K +S+ S++ SE E+EV +V+K+ + + E S E
Sbjct: 58 KADAKKAKKQPPPKKAASSSSGSSSEEDSSESEEEVKVQVKKTTKPVKQESSSDESSDES 117
Query: 240 S 242
S
Sbjct: 118 S 118
>12_02_0628 + 21357876-21359921
Length = 681
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/98 (23%), Positives = 38/98 (38%)
Frame = +2
Query: 236 EESLENASLHDLDIIQVKETVKSIDGYEIIDETEVFDSNVKTDKAKEQKIPCKPSSRNVS 415
+E LE S D ++I + + ID Y++ S+ K DK++ P P SR S
Sbjct: 154 KEQLEKMSELDREMILAERGAR-IDDYKLKQLARASSSSSKADKSRRDSSPPPPPSRARS 212
Query: 416 PTKKSNIPGPSKAEKTPDSPTKSRSISPKXPFLKDLDP 529
+ S ++ + + KDL P
Sbjct: 213 SARTDRSAAKSALDELRAKRMRQQDPEGYRNRFKDLIP 250
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 416 PTKKSNIPGPSKAEKTPDSPTKSRSISPKXPFLKDLDP 529
P +K P P + ++ PTKS + +P P KD P
Sbjct: 200 PLEKDAPPQPPRPQEVHHRPTKSYTGNPPQPLEKDASP 237
>03_05_0267 - 22538631-22539452
Length = 273
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 386 PCKPSSRNVSPTKKSNIPGPSKAEKTPDSPTKSRSISPKXP 508
P +P SP+ P PS A +P S + SR S + P
Sbjct: 175 PARPRWWPCSPSSPPASPSPSPARTSPPSSSPSRGCSARRP 215
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = +3
Query: 3 RSPRPSTSPLRQVPNEEHTKSEEPRQLRTPSPVKKITSTKEFSADFIMSEREQEVLNKVQ 182
+SP P SP + P+E H S P + P+P ++ + + S E + V+
Sbjct: 779 KSPPPH-SPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEGTPPSPVK 837
Query: 183 KSLRKLSPERKSVSPIREKSPS 248
S PE SP EKS S
Sbjct: 838 SS--SPPPEAHVSSPPPEKSSS 857
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 392 KPSSRNVSPTKKSNIPGP--SKAEKTPDSPTKSRSISPKXPFL 514
K S ++PT +NIP P SK E P SRS S F+
Sbjct: 361 KVSDDFINPTAPANIPAPSHSKTETNPPPSYDSRSESVSDDFI 403
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 356 KTDKAKEQKIPCKPSSRNVSPTKKSNIPGPSKAEKTPDSPTKSRSISPKXPFLKDLD 526
++ A + + P K S + SP ++ P A K SP KSRS+S ++D++
Sbjct: 242 RSRSASQSRSPVKERSPSRSPPPATSPPREKSASK---SPVKSRSLSRSPSPVRDIN 295
>12_01_0183 -
1350451-1350477,1350887-1350969,1350977-1352696,
1354258-1354428,1355892-1355939
Length = 682
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 392 KPSSRNVSPTKKSNIPGPSKAEKTPDSPTKSRSI 493
KP R PT P +AEK+ D+ K RSI
Sbjct: 116 KPFCRQKKPTLPKRAKRPQQAEKSNDANIKRRSI 149
>06_03_0924 -
25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 3 RSPRPSTSPLRQVPNEEHTKSEEPRQLRTP 92
RSP S SPLR+ +E+ +EP + P
Sbjct: 427 RSPENSYSPLRKETAQENNSLDEPNNITQP 456
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,456
Number of Sequences: 37544
Number of extensions: 296431
Number of successful extensions: 1189
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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