Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30684
(404 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 24 0.57
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 2.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 2.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 2.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 2.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 2.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 4.0
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 5.3
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 21 7.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 7.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 7.0
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 7.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 9.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 9.3
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 24.2 bits (50), Expect = 0.57
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 145 VYSACLSYYLHTETNYVLYNYSEILNR 65
+ S CL YY T N +LYN I R
Sbjct: 311 ILSGCL-YYFSTTINPILYNLMSIKYR 336
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 142 YSACLSYYLHTETNYVLYN 86
Y + + YYL T N +LYN
Sbjct: 331 YMSGVFYYLSTTVNPLLYN 349
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 1 LATVYDKLGRLTFGYCYLHGLFYLVFHY 84
+A D + R+TF Y L + HY
Sbjct: 458 VAKTIDVIARITFPVAYFMFLTFFFIHY 485
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 1 LATVYDKLGRLTFGYCYLHGLFYLVFHY 84
+A D + R+TF Y L + HY
Sbjct: 444 VAKTIDVIARITFPVAYFMFLTFFFIHY 471
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 1 LATVYDKLGRLTFGYCYLHGLFYLVFHY 84
+A D + R+TF Y L + HY
Sbjct: 478 VAKTIDVIARITFPVAYFMFLTFFFIHY 505
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 1 LATVYDKLGRLTFGYCYLHGLFYLVFHY 84
+A D + R+TF Y L + HY
Sbjct: 427 VAKTIDVIARITFPVAYFMFLTFFFIHY 454
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.4 bits (43), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
Frame = -2
Query: 286 YRQAILARSVFTCV------KMNKKGVEWPYW 209
YR + LA SVF + KM + +E PYW
Sbjct: 319 YRDS-LALSVFALILTALLRKMQEMSIEVPYW 349
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.0 bits (42), Expect = 5.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 4 ATVYDKLGRLTFGYCYLHGLFYLVFHY 84
AT D ++FGYC L + HY
Sbjct: 304 ATALDWFLLMSFGYCIATLLEFAGVHY 330
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 20.6 bits (41), Expect = 7.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +1
Query: 40 GYCYLHGLFYLVFHYNYIKHNLFRCEDSKIGMLNTLL 150
G+C + G + ++ RC +IG+ NTL+
Sbjct: 44 GHCDVIGKKIKELLPEVLNNHCNRCTSRQIGIANTLI 80
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.6 bits (41), Expect = 7.0
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 145 LLLTGVIVILWPRLLVINPERSNMATPLLSYSFSRR*RQIA 267
++L +I+IL R+ NP+ + LLS +++R R ++
Sbjct: 1 MILQTIILILSARICHGNPDAKRLYDDLLS-NYNRLIRPVS 40
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 121 YLHTETNY 98
YLHT TNY
Sbjct: 75 YLHTATNY 82
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 20.6 bits (41), Expect = 7.0
Identities = 5/20 (25%), Positives = 14/20 (70%)
Frame = -2
Query: 97 VLYNYSEILNRIIRANNSIR 38
++Y YS+I++ ++ ++R
Sbjct: 227 IIYYYSQIVSHVVNHEKALR 246
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 221 LHSFLIHFHA 250
LHSF+ H HA
Sbjct: 1737 LHSFMYHEHA 1746
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 221 LHSFLIHFHA 250
LHSF+ H HA
Sbjct: 1733 LHSFMYHEHA 1742
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,588
Number of Sequences: 438
Number of extensions: 2272
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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