Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30683
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0930 - 12480983-12481888                                         29   2.6  
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498...    29   3.4  
03_06_0546 - 34646946-34647289,34647542-34647608                       29   4.5  
07_03_0935 - 22738221-22738328,22739207-22739237,22739901-227400...    28   7.8  

>03_02_0930 - 12480983-12481888
          Length = 301

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 531 PWATPITAPCYYHPACYCRLCCCYRVGRDSFHIN 632
           P A P   P    PA     CCCY   R+S+++N
Sbjct: 44  PPAAPRQPPAAAAPAGGLSPCCCYCPNRESYYLN 77


>01_05_0282 -
           20347915-20348874,20348968-20349012,20349568-20349816,
           20350393-20350581,20351051-20351155,20351165-20351488,
           20351493-20351555
          Length = 644

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 555 PCYYHPACYCRLC 593
           PC+Y P+C CR+C
Sbjct: 538 PCWYCPSCLCRVC 550


>03_06_0546 - 34646946-34647289,34647542-34647608
          Length = 136

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +3

Query: 576 CYCRLCCCYR-VGRDSFHI 629
           C+C   CCYR   RDSFH+
Sbjct: 64  CHCLYSCCYRGKMRDSFHL 82


>07_03_0935 -
           22738221-22738328,22739207-22739237,22739901-22740095,
           22740693-22740782,22740900-22741037,22741959-22742108,
           22743589-22744766
          Length = 629

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 445 GWIVKPLDC*ICRRACFMIIK 507
           GW+ KP+D   CR+ C  +IK
Sbjct: 495 GWLSKPIDQEQCRKRCSNVIK 515


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,918
Number of Sequences: 37544
Number of extensions: 258637
Number of successful extensions: 422
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)