Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30681
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 62 4e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 62 5e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 60 1e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 60 1e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 60 1e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 60 1e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 60 2e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 60 2e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 59 3e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 59 3e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 58 6e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 56 3e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 3e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 56 3e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 55 6e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 52 5e-07
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 52 5e-07
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 52 5e-07
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 52 5e-07
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 51 7e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 51 7e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 50 2e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 50 2e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 49 4e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 47 1e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 47 1e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 47 2e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 46 4e-05
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U00066-10|AAA50744.2| 106|Caenorhabditis elegans Hypothetical p... 43 3e-04
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.002
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 40 0.002
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 40 0.002
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.002
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 39 0.003
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 39 0.003
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 38 0.009
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 37 0.012
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 37 0.016
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 36 0.038
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 36 0.038
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 36 0.038
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 35 0.050
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 33 0.27
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 1.1
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 30 1.4
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 30 1.4
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 29 3.3
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 4.4
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z66513-2|CAA91330.2| 186|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 132 bits (320), Expect = 2e-31
Identities = 57/86 (66%), Positives = 75/86 (87%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPE 435
+V+NYDMAK+IEDYTHRIGRTGRAGK GKA++F+T +D+A+++DLKQVL+ S VS+CPPE
Sbjct: 644 LVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVESPVSSCPPE 703
Query: 436 LMNHPEAQHKPGTVVTKKRREEMISL 513
L NHP+AQ KPG +KKR++E + L
Sbjct: 704 LANHPDAQSKPGVFTSKKRQDETLFL 729
Score = 128 bits (309), Expect = 4e-30
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +2
Query: 5 KRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASL 184
KR+KL E+L+ +PPIIIFVNQKKGAD+L+KGL KLGF LHGGKGQ+QR++AL +L
Sbjct: 560 KRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQAL 619
Query: 185 KGGAKDILVATDVAGRGIDIKDV 253
K G DILVATDVAGRGID+KDV
Sbjct: 620 KEGTSDILVATDVAGRGIDVKDV 642
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 KRRKLTEILQRGV---EPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFAL 175
K+ KL E+L + E IIFV K+ AD L + + + G+ +HG K Q +RD+ L
Sbjct: 360 KQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVL 419
Query: 176 ASLKGGAKDILVATDVAGRGIDIKDV 253
K G I++ATDVA RG+D+ D+
Sbjct: 420 QEFKAGKTPIMLATDVAARGLDVDDI 445
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVL 402
VINYD EDY HRIGRTGR+ K G A +F T +++ DL +VL
Sbjct: 448 VINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVL 495
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 53 IIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGR 232
+IIFV K AD L+ G N+ LHGG+ Q R+ +L L+ G ILVATD+A R
Sbjct: 341 MIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASR 400
Query: 233 GIDIKDV 253
GID+ D+
Sbjct: 401 GIDVPDI 407
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
V+NYD IE+Y HR+GRTGRAG+ G+AMSF+ D + F L Q+ L S P +L
Sbjct: 410 VLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQI-LEKSEQEVPDQL 468
Query: 439 MNHPE 453
E
Sbjct: 469 RRDAE 473
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 61.7 bits (143), Expect = 5e-10
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEP-PIIIFVNQKKGADVLAKGLEKLGFNACT-LHGGKGQEQRDFAL 175
+K KL E+L E I+FV++++ AD + L + G+N+ LHGG Q RD ++
Sbjct: 536 QKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSI 595
Query: 176 ASLKGGAKDILVATDVAGRGIDIKDVI 256
A K G +LVAT VA RG+D+K++I
Sbjct: 596 ADFKTGVIKVLVATSVAARGLDVKNLI 622
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 366
+V+NYD EDY HR+GRTGRAG+ G A +FV E
Sbjct: 623 LVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPE 659
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I+FV+Q+ AD LA L A T+HG + Q +R AL + G+K +L+AT VA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 236 IDIKDV 253
+DIK V
Sbjct: 881 LDIKGV 886
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VINYDM I+DY HRIGRTGR G G+A SF++ ED L +L +VL S PE
Sbjct: 889 VINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS-EDCNLLSELVRVL--SDADQLVPEW 945
Query: 439 M 441
M
Sbjct: 946 M 946
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I+FV+Q+ AD LA L A T+HG + Q +R AL + G+K +L+AT VA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 236 IDIKDV 253
+DIK V
Sbjct: 881 LDIKGV 886
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VINYDM I+DY HRIGRTGR G G+A SF++ ED L +L +VL S PE
Sbjct: 889 VINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS-EDCNLLSELVRVL--SDADQLVPEW 945
Query: 439 M 441
M
Sbjct: 946 M 946
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++FV+Q+ AD+LA L A T+HG + Q +R AL + G+K +L+AT VA RG
Sbjct: 610 MVFVSQRAMADILASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669
Query: 236 IDIKDV 253
+DIK V
Sbjct: 670 LDIKGV 675
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVL 402
VINYDM I+DY HRIGRTGR G +G+A SF++ ED +L +L VL
Sbjct: 678 VINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS-EDCSLLSELVGVL 724
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I+FV+Q+ AD LA L A T+HG + Q +R AL + G+K +L+AT VA RG
Sbjct: 821 IVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 880
Query: 236 IDIKDV 253
+DIK V
Sbjct: 881 LDIKGV 886
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VINYDM I+DY HRIGRTGR G G+A SF++ ED L +L +VL S PE
Sbjct: 889 VINYDMPDNIDDYIHRIGRTGRVGNAGRATSFIS-EDCNLLSELVRVL--SDADQLVPEW 945
Query: 439 M 441
M
Sbjct: 946 M 946
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I+FV Q+K AD LA + A T+HG + Q++R AL + GAK +L+AT V RG
Sbjct: 567 IVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERG 626
Query: 236 IDIKDV 253
+DIK V
Sbjct: 627 LDIKGV 632
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 369
VINYDM I+DY HRIGRTGR G +G+A SF++ D
Sbjct: 635 VINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I+FV Q+K AD LA + A T+HG + Q++R AL + GAK +L+AT V RG
Sbjct: 567 IVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERG 626
Query: 236 IDIKDV 253
+DIK V
Sbjct: 627 LDIKGV 632
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 369
VINYDM I+DY HRIGRTGR G +G+A SF++ D
Sbjct: 635 VINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++FV+Q+ AD LA L A T+HG + Q +R AL + G+K +L+AT VA RG
Sbjct: 610 MVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669
Query: 236 IDIKDV 253
+DIK V
Sbjct: 670 LDIKGV 675
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVL 402
VINYDM I+DY HRIGRTGR G +G+A SF++ ED +L +L VL
Sbjct: 678 VINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS-EDCSLLSELVGVL 724
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++FV+Q+ AD LA L A T+HG + Q +R AL + G+K +L+AT VA RG
Sbjct: 610 MVFVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669
Query: 236 IDIKDV 253
+DIK V
Sbjct: 670 LDIKGV 675
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVL 402
VINYDM I+DY HRIGRTGR G +G+A SF++ ED +L +L VL
Sbjct: 678 VINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS-EDCSLLSELVGVL 724
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPI---IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFA 172
EK KL EIL++ V IIFV +K D A L G A TLHG + Q+ R+
Sbjct: 629 EKNAKLREILKQNVNGKTLKTIIFVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKL 688
Query: 173 LASLKGGAKDILVATDVAGRGIDIKDV 253
+ K ++LV TD+ RGID+ D+
Sbjct: 689 INDFKSNRVNLLVTTDLLSRGIDVSDL 715
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Frame = +1
Query: 259 VINYDMAKTIED-----YTHRIGRTGRAGK--TGKAMSFV---TKEDSALFYDLKQVLLA 408
VIN+D+ D + HR GRTGR G+ G +SFV + DS L L +++++
Sbjct: 718 VINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFVDPQSDRDSLLAPKLVELIIS 777
Query: 409 SSV 417
++
Sbjct: 778 QNL 780
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 58.0 bits (134), Expect = 6e-09
Identities = 26/49 (53%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE-DSALFYDLKQVL 402
VIN+DM + IE+Y HRIGRTGR+G+ G A +F+ K+ + ++ DLKQ+L
Sbjct: 513 VINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLL 561
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 14 KLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 193
++ E LQ+ P ++IF +K D + + L G ++HGGK Q R + + +
Sbjct: 432 RVLECLQK-TSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKN 490
Query: 194 AKDILVATDVAGRGIDIKDV 253
KD+LVATDVA +G+D + +
Sbjct: 491 EKDVLVATDVASKGLDFQGI 510
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EKRRKLTEILQRG-VEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALA 178
EKR L EIL E +++FV K+GA+ LA L + + ++HG Q +R+ L
Sbjct: 383 EKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLE 442
Query: 179 SLKGGAKDILVATDVAGRGIDIKDV 253
+ G ILVAT VA RG+DI +V
Sbjct: 443 LFRSGQCPILVATAVAARGLDIPNV 467
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VINYD+ ++Y HRIGRTGR G G A SF ++ + DLK +++ S+ PE
Sbjct: 470 VINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEV--PEW 527
Query: 439 MNHPEAQHKPG 471
++ A+ + G
Sbjct: 528 LHQVAAEGRIG 538
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EKRRKLTEILQRG-VEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALA 178
EKR L EIL E +++FV K+GA+ LA L + + ++HG Q +R+ L
Sbjct: 367 EKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLE 426
Query: 179 SLKGGAKDILVATDVAGRGIDIKDV 253
+ G ILVAT VA RG+DI +V
Sbjct: 427 LFRSGQCPILVATAVAARGLDIPNV 451
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VINYD+ ++Y HRIGRTGR G G A SF ++ + DLK +++ S+ PE
Sbjct: 454 VINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEV--PEW 511
Query: 439 MNHPEAQHKPG 471
++ A+ + G
Sbjct: 512 LHQVAAEGRIG 522
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EKRRKLTEILQRG-VEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALA 178
EKR L EIL E +++FV K+GA+ LA L + + ++HG Q +R+ L
Sbjct: 364 EKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLE 423
Query: 179 SLKGGAKDILVATDVAGRGIDIKDV 253
+ G ILVAT VA RG+DI +V
Sbjct: 424 LFRSGQCPILVATAVAARGLDIPNV 448
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VINYD+ ++Y HRIGRTGR G G A SF ++ + DLK +++ S+ PE
Sbjct: 451 VINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEV--PEW 508
Query: 439 MNHPEAQHKPG 471
++ A+ + G
Sbjct: 509 LHQVAAEGRIG 519
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EKRRKLTEILQR-GVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALA 178
EKR L ++L G ++FV K+GA LA L + + T+HG Q +R+ L
Sbjct: 412 EKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLD 471
Query: 179 SLKGGAKDILVATDVAGRGIDIKDV 253
+ G ILVAT VA RG+DI +V
Sbjct: 472 LFRTGTAPILVATAVAARGLDIPNV 496
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASS 414
VINYD+ +++Y HRIGRTGR G G A SF ++ + +L +++ ++
Sbjct: 499 VINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEAN 550
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPE 435
+VINYD+ +I Y HR+GRTGRAGK+G A+++ T D + V+ S P
Sbjct: 446 LVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDV-PEY 504
Query: 436 LM 441
LM
Sbjct: 505 LM 506
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 KRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFN--ACTLHGGKGQEQRDFALA 178
K+ + +L+ +PP ++FV K A L K L + N +++ GK ++RD +
Sbjct: 360 KKIAIRNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETME 419
Query: 179 SLKGGAKDILVATDVAGRGIDIKDV 253
+ G +LV T++ GRG+D+ DV
Sbjct: 420 RFRRGEIWVLVCTELLGRGLDLSDV 444
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 369
MVINYDM +DY HR+GRT RAG++G A++ VT+ D
Sbjct: 354 MVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYD 391
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2
Query: 92 LAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDV 253
+A L +LG A LHG QE+R +L K A++ILV TDVA RG+DI V
Sbjct: 299 IAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHV 352
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 369
VIN+DMA+ I+ + HRIGRTGRAG G A + VT++D
Sbjct: 582 VINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEKD 618
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +2
Query: 11 RKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKG 190
R L E G ++IFV +K ++ +AK L+ F+ LHG Q +R+ L +
Sbjct: 503 RNLVEFASLG---KVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK 559
Query: 191 GAKDILVATDVAGRGIDIKDV 253
++ ILVATDVA RG+DI ++
Sbjct: 560 KSQ-ILVATDVAARGLDISEI 579
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IF N ++ D L + + + F LHG Q +RD + + G+ +L+ TD+ RG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 236 IDIKDV 253
ID++ V
Sbjct: 332 IDVQQV 337
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 372
+VINYD+ E+Y HRIGR+GR G+ G A++FVT+ D+
Sbjct: 339 LVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDA 377
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IF N ++ D L + + + F LHG Q +RD + + G+ +L+ TD+ RG
Sbjct: 272 VIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARG 331
Query: 236 IDIKDV 253
ID++ V
Sbjct: 332 IDVQQV 337
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 372
+VINYD+ E+Y HRIGR+GR G+ G A++FVT+ D+
Sbjct: 339 LVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDA 377
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQ 396
+VINYD+ E Y HRIGR+GR G+ G A++FV ++D + D++Q
Sbjct: 336 LVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQ 382
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++F N ++ D L +++ F ++HG Q+ RD + + G +L++TDV RG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 236 IDIKDV 253
+D+ V
Sbjct: 329 LDVPQV 334
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQ 396
+VINYD+ E Y HRIGR+GR G+ G A++FV ++D + D++Q
Sbjct: 336 LVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQ 382
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++F N ++ D L +++ F ++HG Q+ RD + + G +L++TDV RG
Sbjct: 269 VLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARG 328
Query: 236 IDIKDV 253
+D+ V
Sbjct: 329 LDVPQV 334
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 372
+VINYD+ E+Y HRIGR+GR G+ G A++FVT+ D+
Sbjct: 52 LVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDA 90
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 119 FNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGIDIKDV 253
F LHG Q +RD + + G+ +L+ TD+ RGID++ V
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQV 50
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 51.2 bits (117), Expect = 7e-07
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPE 435
+V+N+++ + + Y HR+GR+ RAG+ G A+SFVT+ D L ++QV + E
Sbjct: 408 LVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQV-----IGKKLDE 462
Query: 436 LMNHPEAQHKPGTVVTKKRREEMISLDNPSYSLK 537
L P+ K T V ++E + L+N + K
Sbjct: 463 LKVSPKHVTKYVTQVLVAKKEAELKLENQKFGEK 496
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 32 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 211
++ + ++IF + LA E LGF +LH Q+QR AL++ + +++
Sbjct: 333 EKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVII 392
Query: 212 ATDVAGRGIDIKDV 253
TDVA RG+DI V
Sbjct: 393 CTDVASRGLDIPHV 406
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 181
EK R+L +L ++IFV K + L + L + F + +H QE+R +
Sbjct: 269 EKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQA 328
Query: 182 LKGGAKDILVATDVAGRGIDIKDV 253
K K ILVATD+ GRG+DI+ V
Sbjct: 329 FKDFQKRILVATDLFGRGMDIERV 352
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 247 RCHMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTC 426
R ++V NYDM + + Y HR+ R GR G G A++FV+ E+ A + Q S++
Sbjct: 351 RVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITEL 410
Query: 427 PPEL 438
P ++
Sbjct: 411 PEKI 414
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 181
EK R+L +L ++IFV K + L + L + F + +H QE+R +
Sbjct: 261 EKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQA 320
Query: 182 LKGGAKDILVATDVAGRGIDIKDV 253
K K ILVATD+ GRG+DI+ V
Sbjct: 321 FKDFQKRILVATDLFGRGMDIERV 344
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/64 (34%), Positives = 36/64 (56%)
Frame = +1
Query: 247 RCHMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTC 426
R ++V NYDM + + Y HR+ R GR G G A++FV+ E+ A + Q S++
Sbjct: 343 RVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITEL 402
Query: 427 PPEL 438
P ++
Sbjct: 403 PEKI 406
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVSTCPPEL 438
VIN +M K+I+ Y HR+GRT RAGK G+++S V +++ L LK+++ +++ T L
Sbjct: 489 VINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKL---LKEIVNSNADRTLKQRL 545
Query: 439 M 441
+
Sbjct: 546 V 546
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 181
++ + ++ R + I+FV KK + L LG + Q QR +L+
Sbjct: 403 DREAMVAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESLSK 462
Query: 182 LKGGAKDILVATDVAGRGIDIKDV 253
K D+LV+TD+A RG+DI+ V
Sbjct: 463 FKKAEIDVLVSTDLASRGLDIEGV 486
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVL 402
+V+N+++ + + Y HR+GR+ RAG+ G A+SFVT+ D L ++QV+
Sbjct: 408 LVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVI 456
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 32 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILV 211
++ + ++IF + LA E LGF +LH Q+QR AL++ + +++
Sbjct: 333 EKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVII 392
Query: 212 ATDVAGRGIDIKDV 253
TDVA RG+DI V
Sbjct: 393 CTDVASRGLDIPHV 406
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IFVN K D LA + G + ++H + QEQRD L + G +VA++V RG
Sbjct: 1006 LIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARG 1065
Query: 236 IDI 244
++I
Sbjct: 1066 LNI 1068
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +1
Query: 259 VINYDMAKT--IEDYTHRIGRTGRAGKTGKAMSFVTKED 369
V+NYDM ++Y +RIGRTGRAG TG + +FV E+
Sbjct: 1074 VVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVEN 1112
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IFVN K D LA + G + ++H + QEQRD L + G +VA++V RG
Sbjct: 1006 LIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARG 1065
Query: 236 IDI 244
++I
Sbjct: 1066 LNI 1068
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +1
Query: 259 VINYDMAKT--IEDYTHRIGRTGRAGKTGKAMSFVTKED 369
V+NYDM ++Y +RIGRTGRAG TG + +FV E+
Sbjct: 1074 VVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVEN 1112
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 253 HMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVL 402
++VIN+D + E Y HRIGR+GR G G A++ +T ED ++Q L
Sbjct: 350 NVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQEL 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
IIF N + ++LAK + ++G++ +H Q R+ + G LV +D+ RG
Sbjct: 284 IIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRG 343
Query: 236 IDIKDV 253
IDI+ V
Sbjct: 344 IDIQAV 349
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I+F K+ D + L++ +A LHG + E+R +L K G LV +DV RG
Sbjct: 509 IVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARG 568
Query: 236 IDIKDV 253
+D++ V
Sbjct: 569 LDVQGV 574
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 295 YTHRIGRTGRAGKTGKAMSFVTKEDSALFY 384
Y HRIGR GRA + G ++S V++ + +Y
Sbjct: 589 YVHRIGRVGRAERMGLSISLVSEYEEKAWY 618
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 372
MV++ E Y HRIGRTGR GKTG A++ + EDS
Sbjct: 543 MVVDGFTQPDCETYLHRIGRTGRFGKTGIAINLIDSEDS 581
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IF + K L + + G LHG +R + K G +L+ T+V RG
Sbjct: 459 VIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARG 518
Query: 236 IDIKDV 253
ID+ V
Sbjct: 519 IDVAQV 524
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 372
MV++ E Y HRIGRTGR GKTG A++ + EDS
Sbjct: 568 MVVDGFTQPDCETYLHRIGRTGRFGKTGIAINLIDSEDS 606
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IF + K L + + G LHG +R + K G +L+ T+V RG
Sbjct: 484 VIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARG 543
Query: 236 IDIKDV 253
ID+ V
Sbjct: 544 IDVAQV 549
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 256 MVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDS 372
MV++ E Y HRIGRTGR GKTG A++ + EDS
Sbjct: 952 MVVDGFTQPDCETYLHRIGRTGRFGKTGIAINLIDSEDS 990
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
+IF + K L + + G LHG +R + K G +L+ T+V RG
Sbjct: 868 VIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARG 927
Query: 236 IDIKDV 253
ID+ V
Sbjct: 928 IDVAQV 933
>U00066-10|AAA50744.2| 106|Caenorhabditis elegans Hypothetical
protein R12B2.6 protein.
Length = 106
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = +1
Query: 319 GRAGKTGKAMSFVTKEDSALFYDLKQV 399
GRAGK GKA++F+T +D+A+++DLKQV
Sbjct: 15 GRAGKHGKAITFLTPDDTAVYFDLKQV 41
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQV 399
VINY++ + + HR GRTGRAG+ G +S KE LF + +V
Sbjct: 471 VINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKRLFVKMLKV 517
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 181
EK L +L R I+FVN A L L+ + + LH Q+QR L
Sbjct: 260 EKDTSLVYLLTR-YPGRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEK 318
Query: 182 LKGGAKDILVATDVAGRGIDIKDV 253
+L+ATDVA RG+DI+ +
Sbjct: 319 FSESKNAVLLATDVAARGLDIQGI 342
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV 357
VI+Y + K +E Y HR GRT RA G + V
Sbjct: 345 VIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 377
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALAS 181
EK L +L R I+FVN A L L+ + + LH Q+QR L
Sbjct: 427 EKDTSLVYLLTR-YPGRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEK 485
Query: 182 LKGGAKDILVATDVAGRGIDIKDV 253
+L+ATDVA RG+DI+ +
Sbjct: 486 FSESKNAVLLATDVAARGLDIQGI 509
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV 357
VI+Y + K +E Y HR GRT RA G + V
Sbjct: 512 VIHYQVPKKVEIYIHRSGRTARASHRGLTVVLV 544
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 247 RCHMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQV 399
R ++INYD++ +E+Y R GR G G G +SF T+ D + DLK++
Sbjct: 294 RKSLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDIS---DLKKI 341
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +2
Query: 17 LTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGA 196
L ++L+ E +IF N ++ L + L + HG +R+ +
Sbjct: 218 LCDLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRN 277
Query: 197 KDILVATDVAGRGIDIK 247
+LV TD+ RG++I+
Sbjct: 278 TRVLVTTDLMARGMNIR 294
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 375
V+N+D +T + Y HR+GRT R G A+SF + A
Sbjct: 380 VVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERA 418
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 375
V+N+D +T + Y HR+GRT R G A+SF + A
Sbjct: 447 VVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERA 485
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 14 KLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 193
KLT +L+ ++F +Q + +A L+ G + + Q+ R A+ L+
Sbjct: 249 KLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAK 308
Query: 194 AKDILVATDVAGRGIDIKDV 253
ILV++D+ RGID +V
Sbjct: 309 RVKILVSSDLTARGIDADNV 328
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 253 HMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 366
++V+N D A E Y HRIGR R G G A++ + E
Sbjct: 329 NLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDE 366
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 14 KLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 193
KLT +L+ ++F +Q + +A L+ G + + Q+ R A+ L+
Sbjct: 249 KLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAK 308
Query: 194 AKDILVATDVAGRGIDIKDV 253
ILV++D+ RGID +V
Sbjct: 309 RVKILVSSDLTARGIDADNV 328
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 253 HMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKE 366
++V+N D A E Y HRIGR R G G A++ + E
Sbjct: 329 NLVVNIDAAANEETYFHRIGRAARFGAHGAAVTLLEDE 366
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 255 MTSLMSIPRPATSVATRISLAPPLRLASAKSRC--SWPLPPCSVQALKPSFSSPFARTSA 82
+ +L P + S+A++ PP L S ++ PLPP SV+ PS S+P T+A
Sbjct: 279 LLTLNGSPTSSESLASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAA 338
Query: 81 PFFWLTKI 58
P + T +
Sbjct: 339 PIIFSTAV 346
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 255 MTSLMSIPRPATSVATRISLAPPLRLASAKSRC--SWPLPPCSVQALKPSFSSPFARTSA 82
+ +L P + S+A++ PP L S ++ PLPP SV+ PS S+P T+A
Sbjct: 281 LLTLNGSPTSSESLASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAA 340
Query: 81 PFFWLTKI 58
P + T +
Sbjct: 341 PIIFSTAV 348
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 255 MTSLMSIPRPATSVATRISLAPPLRLASAKSRC--SWPLPPCSVQALKPSFSSPFARTSA 82
+ +L P + S+A++ PP L S ++ PLPP SV+ PS S+P T+A
Sbjct: 279 LLTLNGSPTSSESLASQRIFHPPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAA 338
Query: 81 PFFWLTKI 58
P + T +
Sbjct: 339 PIIFSTAV 346
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKL--GFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAG 229
++FV+ K A L + +L G L G Q++R +L+ATDVA
Sbjct: 324 LVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVAS 383
Query: 230 RGIDIKDVIW 259
RG+D + + W
Sbjct: 384 RGLDFEHIDW 393
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVT-KEDSALFYDLKQ 396
VI D I+DY HR+GR+ R +G ++ V+ ++ A+ L++
Sbjct: 394 VIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVSPSQEEAMIGKLEK 440
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 EKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEK-LGFNAC-TLHGGKGQEQRDFAL 175
EK E +++ + I+IF K E+ LG +HG R +
Sbjct: 243 EKTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQI 302
Query: 176 ASLKGGAKDILVATDVAGRGIDIKDVIW 259
+ ++++TDV RGIDI D+ W
Sbjct: 303 KAFSDSTNGVMISTDVMARGIDISDIDW 330
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSA 375
VI +D+ K + HR GRT R G+ G A+ + E A
Sbjct: 331 VIQFDLPKHSSWFVHRAGRTARCGREGNALILIASEQLA 369
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 35.5 bits (78), Expect = 0.038
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +2
Query: 14 KLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGG 193
K E+ R P II+ K+ D + L ++G + H G + QR+ A
Sbjct: 436 KTDEVKGRHFGGPTIIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREKAHTDFMRD 495
Query: 194 AKDILVATDVAGRGIDIKDV 253
+VAT G GID DV
Sbjct: 496 KITTIVATVAFGMGIDKPDV 515
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKED 369
VI+Y IE Y IGR GR G F +D
Sbjct: 518 VIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKD 554
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDL 390
VIN + + HR+GR RAG++G A+S + ++ DL
Sbjct: 337 VINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDL 380
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++F K + + L + G + ++ R + +ILV TDVA RG
Sbjct: 269 VVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARG 328
Query: 236 IDI 244
+DI
Sbjct: 329 VDI 331
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDL 390
VIN + + HR+GR RAG++G A+S + ++ DL
Sbjct: 337 VINLHFPPKAKLFVHRVGRVARAGRSGTAISLIANDELPYLTDL 380
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
++F K + + L + G + ++ R + +ILV TDVA RG
Sbjct: 269 VVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARG 328
Query: 236 IDI 244
+DI
Sbjct: 329 VDI 331
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 35.1 bits (77), Expect = 0.050
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +2
Query: 17 LTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGA 196
L L++ +++F + + L + ++HG + Q++R
Sbjct: 305 LFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAE 364
Query: 197 KDILVATDVAGRGIDIKDVIW 259
IL+ TDVA RG+DI V W
Sbjct: 365 TGILLCTDVAARGLDIPAVDW 385
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 259 VINYDMAKTIEDYTHRIGRTGR-AGKTGKAMSFVTKEDSALFYDLK 393
++ YD +Y HR+GRT R +GKA+ + E+ LK
Sbjct: 386 IVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLRYLK 431
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I++ + +AK LE G A H G G++ R+ ++ AT G G
Sbjct: 418 IVYCRSRNECGQVAKMLEIAGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMG 477
Query: 236 IDIKDV 253
ID DV
Sbjct: 478 IDKPDV 483
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 253 HMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFV 357
H +I +M+ + Y HRIGR GR G GK+ V
Sbjct: 447 HTII-MEMSADFDTYKHRIGRVGRDGCGGKSTVLV 480
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I++ +K + + L K G +A H G R S D++ AT G G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 236 IDIKDV 253
ID DV
Sbjct: 533 IDKPDV 538
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +2
Query: 56 IIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRG 235
I++ +K + + L K G +A H G R S D++ AT G G
Sbjct: 473 IVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMG 532
Query: 236 IDIKDV 253
ID DV
Sbjct: 533 IDKPDV 538
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 148 FTTMQRTGIETKFFKSLCKNICTFFLVNKNNN 53
F + T KFF CK +C ++N N+N
Sbjct: 36 FNHSELTSETIKFFPKKCKAVCGILVINSNSN 67
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 148 FTTMQRTGIETKFFKSLCKNICTFFLVNKNNN 53
F + T FF C+ +C F ++N N+N
Sbjct: 475 FNHFELTSETIDFFPKKCETVCGFLMINSNSN 506
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 271 DMAKTIEDYTHRIGRTGRAGKTGKA 345
+M+ Y HRIGR GR G G+A
Sbjct: 450 EMSTDFPSYMHRIGRVGRDGCGGRA 474
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +2
Query: 11 RKLTEILQRGVEPPIIIFVNQKKGADVLAK-GLEKLGFNACTLHGGKGQE---QRDFALA 178
R + + QR + F+N+ K D G + +G+ T G Q+ ++ L
Sbjct: 762 RVIIFVTQRSTAQRVSDFLNESKVLDQFGNYGEQMVGYVLGTNKQGAVQQTSQEQQLTLD 821
Query: 179 SLKGGAKDILVATDVAGRGIDI 244
G ++VAT V G+D+
Sbjct: 822 KFNNGRLKVIVATSVVEEGLDV 843
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 237 IPRPATSVATRISLAPPLRLASAKSRCSWPLPPC 136
IPR S + +PP ++ +AK + W +PPC
Sbjct: 221 IPRAPPSPPAPVMHSPPRKM-TAKDQNDWKIPPC 253
>Z66513-2|CAA91330.2| 186|Caenorhabditis elegans Hypothetical
protein F54D5.3 protein.
Length = 186
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 115 KFFKSLCKNICTFFLVNKNNNGWFDTTLQ 29
K K+ CKNI ++N N GW T +Q
Sbjct: 121 KSTKNTCKNIVNTLVLNLNRPGWAITCIQ 149
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -3
Query: 273 IVINDHMTSLMSIPRPATSVATRISLAPPLRLASAKSRCSWP--LPPCSVQALKPSFSSP 100
+ I +S +S P PA+ ATR SL P S +S S P + P + L P
Sbjct: 12 LAIPQQFSSRLSPPSPASPAATRRSL--PTSPISRRSLPSTPRTVSPRRLNNLLPDVDEH 69
Query: 99 FARTS 85
FA TS
Sbjct: 70 FASTS 74
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 192 PPLRLASAKSRCSWPLPPCSVQALKPSFSSPFARTSAP 79
PP+ + + ++ C+ P S + PS+S+ +A AP
Sbjct: 36 PPVPICAPQTICAQQAPCSSSSSYSPSYSASYASVPAP 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,502,285
Number of Sequences: 27780
Number of extensions: 330928
Number of successful extensions: 1055
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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