Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30679
(497 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 37 0.008
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 36 0.018
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 33 0.096
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 33 0.13
03_06_0479 + 34217170-34217172,34217337-34217786 31 0.39
05_01_0103 + 686770-687017,687120-687270 31 0.68
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 30 1.2
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.2
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 29 1.6
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 2.1
08_02_0407 + 16818621-16819403 29 2.7
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 28 3.6
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 27 6.3
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 6.3
01_06_1522 - 37962431-37963060,37963216-37963542 27 6.3
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 8.4
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 8.4
09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183 27 8.4
05_06_0121 - 25762247-25762876,25762961-25763134,25763899-25764186 27 8.4
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 27 8.4
05_01_0576 - 5130589-5131995 27 8.4
02_01_0695 - 5202091-5202498,5204103-5204588 27 8.4
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 115
LY+SS + KK L G+Q +QATD E S +A++++++
Sbjct: 121 LYASSNERFKKELNGIQLEVQATDAGEISLDALKDRVK 158
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 109
LY+SS D K+ L G+Q +QATD SE S + V+ +
Sbjct: 121 LYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 156
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 33.5 bits (73), Expect = 0.096
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATKPNPLSD 181
L SS L +S G + A ++ +EA+ + R R+ F++EL P+P S
Sbjct: 210 LPSSEELPLAESFPGNSGLLTAAKVARYDKEALVKFFRMLIRR-RYFSNELPA-PSPWSL 267
Query: 182 TPALTT-RGHDTTSRLVLLQRKTNSXXXXXXXVVGPLVSPRG*VPPPPAY 328
TP T +TT+ L QRK+ + V PL + R PPP Y
Sbjct: 268 TPREDTILPVETTNDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLY 317
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 109
LY+SS D ++ L G+Q IQATD SE S + + +
Sbjct: 108 LYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRAR 143
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEE 106
+Y+SS + KK L GVQ +QATD SE + + +++
Sbjct: 113 VYASSNEGFKKELDGVQIDLQATDPSELTLDVLKD 147
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 100
+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 95 IYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 109
LY++S + ++ L GV IQATD SE E + E+
Sbjct: 108 LYATSKERFRRELDGVHYEIQATDPSELDIELLRER 143
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 375 AAPPFKPKRITASRQK*AGGGGTYP 301
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 2 LYSSSFDALKKSLVGVQKYIQATDLSEASQ 91
LYS+S D +K+ L G IQATD +E Q
Sbjct: 108 LYSTSKDRIKQELDGFHYEIQATDPTETPQ 137
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 335 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 436
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>08_02_0407 + 16818621-16819403
Length = 260
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 116 RGASLRRPPETLPRGRWLGCTSELRQGTFSERR 18
RGA ++ P+ +GRWL T+ R+ T + RR
Sbjct: 72 RGAKTKKTPQNAEQGRWL--TTSHRRWTITSRR 102
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 25 SEKVPCRSSEVHPSHRPLGSVSGGRRREAPRHRSPINSI 141
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 22 RSEKVPCRSSEVHPSHRPLGSVSGGRRREAPRHRSPINSIYTRA 153
RS + RS P +R S S GRR +PR RSP Y+R+
Sbjct: 122 RSPRYRGRSRSRSPRYRR--SPSYGRRSYSPRDRSPKRRSYSRS 163
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 171 GFGFVASSCVNAVYWRSVARSFSS 100
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
>01_06_1522 - 37962431-37963060,37963216-37963542
Length = 318
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 470 MVGRAHSPPGVKWLLEAID 414
+VG+ H PPG +WL E +D
Sbjct: 44 LVGQLHLPPGGRWLDEYMD 62
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 14 SFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 112
S+DALKKS+ G+ + AT++ E E L
Sbjct: 236 SWDALKKSINGLVNKVNATNIKNIVPELFAENL 268
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 97 RRREAPRHRSPINSIYTRARDETEPALRHSCPDD 198
R R A R RSP +R + P+ RH C D
Sbjct: 358 RHRRAMRSRSPSKRRRHGSRGRSPPSSRHGCAKD 391
>09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183
Length = 359
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = -3
Query: 306 YPRGLTRGPTTSKINHIILFV---FLCNNTKRLVV--SW 205
Y G+ GP ++INH +L V NNTK +V SW
Sbjct: 265 YKSGVYSGPCGTRINHAVLAVGYGVTLNNTKYWIVKNSW 303
>05_06_0121 - 25762247-25762876,25762961-25763134,25763899-25764186
Length = 363
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 67 HRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDDTRP 207
H P G R +PR+ + S RAR ++ P RH + RP
Sbjct: 274 HGPASPAKG--RVVSPRYMADTASSVARARCQSAPRQRHGAAGEPRP 318
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 19 RRSEKVPCRSSEVHPSHRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDD 198
R +E V RS HPS R G + R RH S + Y R + +L D
Sbjct: 644 RAAEGVRHRSRTPHPSGRQRAHGDGRQGRSQTRHSSRCSCRYRSRRTRSPSSLTPRDQDG 703
Query: 199 T 201
T
Sbjct: 704 T 704
>05_01_0576 - 5130589-5131995
Length = 468
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 1 VVL*LVRRSEKVPCRSSEVHPSHRPLGSVSGGRRREAPRHRSPINSIYTRAR 156
VV L +R+ K P SS PSH G GG E R ++ R R
Sbjct: 63 VVSRLSKRTRKAPSSSSS--PSHSDGGGGGGGEGNEPAAERGGGRRVWVRER 112
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 366 PFKPKRITASRQK*AGGGGTYP 301
PF P + A++ K AGGGG P
Sbjct: 203 PFYPTKANAAQSKAAGGGGCRP 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,590,395
Number of Sequences: 37544
Number of extensions: 338699
Number of successful extensions: 1104
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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