Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30677
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 118 5e-27
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 118 5e-27
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 118 5e-27
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 75 6e-14
07_03_1358 - 25984897-25984997,25985623-25985650 47 1e-05
07_03_1357 - 25982861-25983068,25983354-25983361 43 2e-04
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 32 0.32
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 31 0.56
09_02_0566 + 10732359-10732497,10733114-10733267,10733448-107335... 29 2.3
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 29 3.0
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 4.0
03_06_0069 - 31449319-31450368 28 5.2
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 5.2
05_05_0313 - 24026142-24026708 28 6.9
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 9.2
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 27 9.2
07_03_0366 + 17321948-17322331 27 9.2
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 27 9.2
02_05_1008 - 33461225-33462334 27 9.2
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 118 bits (283), Expect = 5e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +2
Query: 296 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 475
Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNIPSF+VR
Sbjct: 92 QNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVR 151
Query: 476 LDSGKHIDFSL 508
++S KHIDFSL
Sbjct: 152 VESEKHIDFSL 162
Score = 104 bits (249), Expect = 7e-23
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +3
Query: 51 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 230
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 231 KRLFEGNA 254
+R+FEG A
Sbjct: 70 RRIFEGEA 77
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 511 SPFGGGRPGRVKRKNLRKGQGGG 579
SPFGGG PGRVKRKN +K GGG
Sbjct: 164 SPFGGGPPGRVKRKNQKKASGGG 186
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 118 bits (283), Expect = 5e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +2
Query: 296 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 475
Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNIPSF+VR
Sbjct: 115 QNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVR 174
Query: 476 LDSGKHIDFSL 508
++S KHIDFSL
Sbjct: 175 VESEKHIDFSL 185
Score = 103 bits (246), Expect = 2e-22
Identities = 45/66 (68%), Positives = 56/66 (84%)
Frame = +3
Query: 57 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 236
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 237 LFEGNA 254
+FEG A
Sbjct: 95 IFEGEA 100
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 511 SPFGGGRPGRVKRKNLRKGQGGG 579
SPFGGG PGRVKRKN +K GGG
Sbjct: 187 SPFGGGPPGRVKRKNQKKASGGG 209
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 118 bits (283), Expect = 5e-27
Identities = 55/71 (77%), Positives = 64/71 (90%)
Frame = +2
Query: 296 QMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 475
Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNIPSF+VR
Sbjct: 308 QNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMVR 367
Query: 476 LDSGKHIDFSL 508
++S KHIDFSL
Sbjct: 368 VESEKHIDFSL 378
Score = 104 bits (249), Expect = 7e-23
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +3
Query: 51 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 230
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 231 KRLFEGNA 254
+R+FEG A
Sbjct: 286 RRIFEGEA 293
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 511 SPFGGGRPGRVKRKNLRKGQGGG 579
SPFGGG PGRVKRKN +K GGG
Sbjct: 380 SPFGGGPPGRVKRKNQKKASGGG 402
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = +3
Query: 51 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 230
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV +ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRV-----------QELLTLDEKNP 58
Query: 231 KRLFEGNA 254
+R+FEG A
Sbjct: 59 RRIFEGEA 66
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +2
Query: 290 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 430
E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +LIRQ HI
Sbjct: 79 EGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHVLIRQHHI 125
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 51 FSKTYVTPRRPFEKARLDQELKIIGEYG 134
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 431 RVRKQVVNIPSFIVRLDSGKHIDFSL 508
RV +Q+VNIPSFIVRL+S KHI FSL
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSL 28
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 511 SPFGGGRPGRVKRKNLRKGQGGG 579
SP GG RVKRKN + GGG
Sbjct: 30 SPLGGSPAVRVKRKNQKASGGGG 52
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 347 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 472
RRL T + K A+ + A I+Q H+RV + V P+F+V
Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 520 GGGRPGRVKRKNLRKGQGGGAPMMK 594
G RPG RKN +GQGGG + K
Sbjct: 1369 GSSRPGEWNRKNNNRGQGGGREVWK 1393
>09_02_0566 +
10732359-10732497,10733114-10733267,10733448-10733519,
10733701-10733769,10734430-10734501,10734590-10734661,
10734769-10734840,10734928-10734999,10735121-10735192,
10735293-10735364,10735435-10735506,10735826-10735897,
10736039-10736104,10736638-10736676,10736787-10736845,
10737166-10737545,10737629-10737824,10738012-10738179,
10738618-10738736,10738873-10739083,10739163-10739403,
10739830-10739980,10740469-10740828
Length = 999
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 404 RILIRQRHIRVRKQVVN--IPSFIVRLDSGKHIDFSLNLRSVEV 529
R L+ + I +R +N IPS+I +D+ KH+D S N + E+
Sbjct: 281 RELVSMKTIILRNCSINGSIPSYIGNMDNLKHLDLSFNKLTGEI 324
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 346 ASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPIIYCA 474
A+S G SW CQ++DPAK Y+ Q H I+ A
Sbjct: 394 AASLVKGNLSWRSREFLDCQSYDPAKVYNFIQTGV-HGRIFAA 435
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 329 IEDFLERRLQTQVFKAGLAKSIHHAR 406
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 401 HDGWTSPGQL*TPASADDAPRSPQSSDQAHNRVSSVFHPVLQYE 270
HD +S G L P+SA +P + SDQ H VS+ P Y+
Sbjct: 237 HDVLSSLG-LKLPSSASSSPAASYYSDQLHAVVSNAGRPQAPYD 279
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 105 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 227
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>05_05_0313 - 24026142-24026708
Length = 188
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 523 GGRPGRVKRKNLRKGQGGGAPMMKRKI 603
GG GR+ RK +G GGG +R+I
Sbjct: 22 GGGAGRMHRKGKHQGDGGGGGGKRREI 48
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 84 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 218
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 270 FVLEYWMKNR*NSIMCLV*RLRTSWSVVC 356
FV +W + + M LV RL TSW+VVC
Sbjct: 273 FVDAFWNSKKQSFTMHLV-RLMTSWAVVC 300
>07_03_0366 + 17321948-17322331
Length = 127
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 508 ESPFGGGRPGRVKRKNLRKGQGGGA 582
+S GGG R +R+ R+G GGGA
Sbjct: 40 QSRHGGGGRRRRQRRGRRRGSGGGA 64
>03_05_0530 -
25306788-25306919,25307446-25308037,25308152-25308975,
25309533-25309592,25310115-25310180,25310318-25310461,
25310616-25310756,25310898-25311056,25311818-25311884,
25311986-25312158,25312237-25312333,25312410-25312528,
25312867-25312951,25313120-25313321,25314456-25314633
Length = 1012
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 520 GGGRPGRVKRKNLRKGQGGGAP-MMKRK 600
GGG GR +R R+G GGG P +M+RK
Sbjct: 5 GGGEVGRRRR---RRGWGGGFPSLMRRK 29
>02_05_1008 - 33461225-33462334
Length = 369
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/69 (28%), Positives = 39/69 (56%)
Frame = +2
Query: 290 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 469
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 470 VRLDSGKHI 496
+ +DSG+ +
Sbjct: 217 L-IDSGRRV 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,265,912
Number of Sequences: 37544
Number of extensions: 369986
Number of successful extensions: 1047
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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