Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30676
         (336 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p pro...   121   2e-28
AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p pro...   121   2e-28
AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC...   121   2e-28
AY113285-1|AAM29290.1|  224|Drosophila melanogaster AT20140p pro...    27   8.0  
AE014134-2650|AAN10920.1|  312|Drosophila melanogaster CG31735-P...    27   8.0  
AE014134-2649|AAN10919.2|  362|Drosophila melanogaster CG31735-P...    27   8.0  

>AY118446-1|AAM48475.1|  208|Drosophila melanogaster SD17528p
           protein.
          Length = 208

 Score =  121 bits (292), Expect = 2e-28
 Identities = 54/89 (60%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   SHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLL 175
           +HY LPLGRK+  K  + E+   ++ KKRS+K  +KYL RQ+  KVE ALE+QF +GR+L
Sbjct: 115 AHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRIL 174

Query: 176 ACVASRPGQCGRADGYILEGKELEFYQER 262
           AC++SRPGQCGR+DGYILEGKELEFY ++
Sbjct: 175 ACISSRPGQCGRSDGYILEGKELEFYLKK 203


>AY118424-1|AAM48453.1|  208|Drosophila melanogaster RH06886p
           protein.
          Length = 208

 Score =  121 bits (292), Expect = 2e-28
 Identities = 54/89 (60%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   SHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLL 175
           +HY LPLGRK+  K  + E+   ++ KKRS+K  +KYL RQ+  KVE ALE+QF +GR+L
Sbjct: 115 AHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRIL 174

Query: 176 ACVASRPGQCGRADGYILEGKELEFYQER 262
           AC++SRPGQCGR+DGYILEGKELEFY ++
Sbjct: 175 ACISSRPGQCGRSDGYILEGKELEFYLKK 203


>AE014297-4463|AAN14192.1|  208|Drosophila melanogaster CG7808-PC
           protein.
          Length = 208

 Score =  121 bits (292), Expect = 2e-28
 Identities = 54/89 (60%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   SHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLL 175
           +HY LPLGRK+  K  + E+   ++ KKRS+K  +KYL RQ+  KVE ALE+QF +GR+L
Sbjct: 115 AHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRIL 174

Query: 176 ACVASRPGQCGRADGYILEGKELEFYQER 262
           AC++SRPGQCGR+DGYILEGKELEFY ++
Sbjct: 175 ACISSRPGQCGRSDGYILEGKELEFYLKK 203


>AY113285-1|AAM29290.1|  224|Drosophila melanogaster AT20140p
           protein.
          Length = 224

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 98  RKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQ 202
           R  + R ++ K+   +  +FH GR+L+ VA+R  Q
Sbjct: 33  RNSVCRSKVEKLLTTMIFRFHNGRVLSMVANRMSQ 67


>AE014134-2650|AAN10920.1|  312|Drosophila melanogaster CG31735-PA,
           isoform A protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 98  RKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQ 202
           R  + R ++ K+   +  +FH GR+L+ VA+R  Q
Sbjct: 121 RNSVCRSKVEKLLTTMIFRFHNGRVLSMVANRMSQ 155


>AE014134-2649|AAN10919.2|  362|Drosophila melanogaster CG31735-PB,
           isoform B protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 98  RKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQ 202
           R  + R ++ K+   +  +FH GR+L+ VA+R  Q
Sbjct: 171 RNSVCRSKVEKLLTTMIFRFHNGRVLSMVANRMSQ 205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,109,376
Number of Sequences: 53049
Number of extensions: 156773
Number of successful extensions: 503
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)