Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30671
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 229 1e-60
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 227 7e-60
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 38 0.010
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 38 0.010
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 38 0.010
U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical pr... 31 0.68
U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical pr... 31 0.68
U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 31 0.90
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 30 2.1
U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical pr... 29 4.8
U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.8
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical ... 28 8.4
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 229 bits (561), Expect = 1e-60
Identities = 111/170 (65%), Positives = 132/170 (77%)
Frame = +1
Query: 253 SQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLK 432
+QNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HALE+G+K
Sbjct: 62 AQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIK 121
Query: 433 VIACIGETLEERESGQD*GSCF*TIKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQA 612
V+ CIGE LEERE+G F ++A+V G WENIV+AYEPVWAIGTGKTA+ +QA
Sbjct: 122 VVFCIGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQA 180
Query: 613 QDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLV 762
Q+VH +R +L VS +V+DA RI YGGSVTA NA EL DIDGFLV
Sbjct: 181 QEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLV 230
Score = 62.5 bits (145), Expect = 3e-10
Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Frame = +2
Query: 71 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 250
M RKF VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V V
Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60
Query: 251 AARTVGSLQKELLLVKFHPL*SKTLE*IGLYLVILKEEQFXXXXXXXXXXXXXXXXXXA* 430
AA+ + K + P K L GL VIL +
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDL---GLEWVILGHSERRHVFGESDALIAEKTVHALE 117
Query: 431 KSLPVLV----RLSKRENLGKTEEVVFRQLK 511
+ V+ +L +RE G T++V FRQL+
Sbjct: 118 AGIKVVFCIGEKLEERE-AGHTKDVNFRQLQ 147
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 227 bits (555), Expect = 7e-60
Identities = 109/170 (64%), Positives = 132/170 (77%)
Frame = +1
Query: 253 SQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLK 432
+QNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK HALE+G+K
Sbjct: 62 AQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIK 121
Query: 433 VIACIGETLEERESGQD*GSCF*TIKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQA 612
V+ CIGE LEERE+G F ++A+V G WENIV+AYEPVWAIGTGKTA+ +QA
Sbjct: 122 VVFCIGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQA 180
Query: 613 QDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLV 762
Q+VH +R +L VS +V+DA RI YGGSVTA NA ++ DIDGFLV
Sbjct: 181 QEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAADVGKKPDIDGFLV 230
Score = 62.5 bits (145), Expect = 3e-10
Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Frame = +2
Query: 71 MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 250
M RKF VGGNWKMNGD ++ IV L + +V+V+V PA YL+Y K+ + V V
Sbjct: 1 MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60
Query: 251 AARTVGSLQKELLLVKFHPL*SKTLE*IGLYLVILKEEQFXXXXXXXXXXXXXXXXXXA* 430
AA+ + K + P K L GL VIL +
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDL---GLEWVILGHSERRHVFGESDALIAEKTVHALE 117
Query: 431 KSLPVLV----RLSKRENLGKTEEVVFRQLK 511
+ V+ +L +RE G T++V FRQL+
Sbjct: 118 AGIKVVFCIGEKLEERE-AGHTKDVNFRQLQ 147
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 122 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAARTVGSLQKELLLVKF 301
++INE+V+ + K L P E++ + AI L+Y+ T P+ E A V L++ELLL
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE--ANLVTLLKEELLLDDR 521
Query: 302 H 304
H
Sbjct: 522 H 522
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 122 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAARTVGSLQKELLLVKF 301
++INE+V+ + K L P E++ + AI L+Y+ T P+ E A V L++ELLL
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE--ANLVTLLKEELLLDDR 521
Query: 302 H 304
H
Sbjct: 522 H 522
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 122 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAARTVGSLQKELLLVKF 301
++INE+V+ + K L P E++ + AI L+Y+ T P+ E A V L++ELLL
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE--ANLVTLLKEELLLDDR 521
Query: 302 H 304
H
Sbjct: 522 H 522
>U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical
protein F31F7.1b protein.
Length = 168
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = -3
Query: 504 CLKTTSSVLPRFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKY 340
C+ S L R S + L + GN + + R +G+SN LF K NC+ F K
Sbjct: 67 CVSVVSLALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKM 126
Query: 339 NPIYSNVFDHSG*NFTSKSSFWRL 268
+P+Y+ F NF + FW +
Sbjct: 127 SPLYATRF-----NFALMNEFWHM 145
>U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical
protein F31F7.1c protein.
Length = 273
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = -3
Query: 504 CLKTTSSVLPRFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKY 340
C+ S L R S + L + GN + + R +G+SN LF K NC+ F K
Sbjct: 67 CVSVVSLALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKM 126
Query: 339 NPIYSNVFDHSG*NFTSKSSFWRL 268
+P+Y+ F NF + FW +
Sbjct: 127 SPLYATRF-----NFALMNEFWHM 145
>U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical
protein F31F7.1a protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = -3
Query: 504 CLKTTSSVLPRFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKY 340
C+ S L R S + L + GN + + R +G+SN LF K NC+ F K
Sbjct: 67 CVSVVSLALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKM 126
Query: 339 NPIYSNVFDHSG*NFTSKSSFWRL 268
+P+Y+ F NF + FW +
Sbjct: 127 SPLYATRF-----NFALMNEFWHM 145
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 113 GDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAARTVGSLQK 280
GD N I+++++ +EV+ G PAI+ + V+ I+P + ++TV LQK
Sbjct: 47 GDSNYQEHIISDVEPQDFQKFLEVVHGEPAIFEATVQKILPLAQKFGSKTV--LQK 100
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 541 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 714
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 715 NAKELASCK 741
+ CK
Sbjct: 500 LFERWPPCK 508
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 541 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 714
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 715 NAKELASCK 741
+ CK
Sbjct: 500 LFERWPPCK 508
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 568 VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 702
V+++ TG+ T AQ HH + ++++VS S SDA+R+ G S
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRMVRGSS 2655
>U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical
protein C05D10.1c protein.
Length = 457
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 690 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 571
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 191 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230
>U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical
protein C05D10.1b protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 690 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 571
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 159 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 690 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 571
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 263 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302
>AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical
protein C49G7.7 protein.
Length = 893
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 101 WKMNGDKNQINEIVNNLKKGPLDPNVEVI 187
W++NGD+ ++EI N+ LD +V VI
Sbjct: 83 WEINGDRETLSEIQNHNSYRDLDMDVLVI 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,699
Number of Sequences: 27780
Number of extensions: 391513
Number of successful extensions: 1161
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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