Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30666
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   3.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   9.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    20   9.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    20   9.1  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 192 IFLVSVIIVDRHNFFYVILWHPTWQIFFV 106
           +F+VS+ + D      V+ +  TW++F V
Sbjct: 102 MFIVSLAVADLMVGLAVLPFSATWEVFKV 130


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 82  SAVPAIVPDEEDLPGWVPKNYIE 150
           S+  A++ DE+   GW   N +E
Sbjct: 247 SSDSAVLSDEDQTKGWDGSNMVE 269


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 33  APCQLFIAEQNGITVHVG 86
           A   +FIA+ NGI++ +G
Sbjct: 405 AVAAIFIAQMNGISLGIG 422


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 292 PGNNPVTPSMTPSTSRRH 239
           PG +    S+TP T+RR+
Sbjct: 261 PGFDDYMASLTPDTNRRN 278


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 292 PGNNPVTPSMTPSTSRRH 239
           PG +    S+TP T+RR+
Sbjct: 351 PGFDDYMASLTPDTNRRN 368


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 117 IFFVGYNSGYGRRVL 73
           ++ + Y   YG+RVL
Sbjct: 145 VYLIDYPEDYGKRVL 159


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 117 IFFVGYNSGYGRRVL 73
           ++ + Y   YG+RVL
Sbjct: 145 VYLIDYPEDYGKRVL 159


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 117 IFFVGYNSGYGRRVL 73
           ++ + Y   YG+RVL
Sbjct: 145 VYLIDYPEDYGKRVL 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,711
Number of Sequences: 438
Number of extensions: 2240
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)