Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30665
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   9.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.1  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 112 QACTDQKHLESCRQCL 65
           Q C  ++H +SC  CL
Sbjct: 344 QVCRSRRHSDSCCLCL 359


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 160 RVHDTKRPKPLPEPKVXYP 216
           +VH TK PKP  + K   P
Sbjct: 244 KVHATKPPKPQTKTKPTSP 262


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 440 SYNAHHTAQRDYLKHQR 390
           SY   HTA  D+L  Q+
Sbjct: 21  SYAGRHTADMDFLHKQK 37


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 440 SYNAHHTAQRDYLKHQR 390
           SY   HTA  D+L  Q+
Sbjct: 21  SYAGRHTADMDFLHKQK 37


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 428 HHTAQRDYLKH 396
           HHTA   ++KH
Sbjct: 362 HHTASESFMKH 372


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 167 WTRASQKYPKPGRGKFR 117
           WT  S +   P  GKF+
Sbjct: 32  WTATSHEASAPAEGKFK 48


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 496 LFNTKNIKKQNKTLSNALLHITRTTPPS 413
           ++   NI+ +NKT +      TR TP S
Sbjct: 315 VYGAFNIRDRNKTSARPTTIETRVTPLS 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,500
Number of Sequences: 438
Number of extensions: 2984
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)