Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30660
(578 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 144 8e-35
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 144 8e-35
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 144 8e-35
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 144 8e-35
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 144 8e-35
BT003451-1|AAO39454.1| 739|Drosophila melanogaster RH45372p pro... 29 6.0
AE014134-1899|AAN10755.1| 739|Drosophila melanogaster CG31719-P... 29 6.0
AE014134-1898|AAF52960.2| 739|Drosophila melanogaster CG31719-P... 29 6.0
AE014134-1897|AAF52959.2| 739|Drosophila melanogaster CG31719-P... 29 6.0
BT024207-1|ABC86269.1| 706|Drosophila melanogaster RE41071p pro... 28 7.9
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 28 7.9
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 28 7.9
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 144 bits (349), Expect = 8e-35
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +3
Query: 243 LPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
LPA LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 175 LPA-LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 144 bits (349), Expect = 8e-35
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +3
Query: 243 LPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
LPA LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 175 LPA-LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 144 bits (349), Expect = 8e-35
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +3
Query: 243 LPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
LPA LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 175 LPA-LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 144 bits (349), Expect = 8e-35
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +3
Query: 243 LPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
LPA LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 175 LPA-LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 144 bits (349), Expect = 8e-35
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +3
Query: 243 LPASLCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 422
LPA LCRKMGVPYCIVKGK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNE
Sbjct: 175 LPA-LCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNE 233
Query: 423 RYEELRKHWGGGVLGNKSNARIAKLE 500
R+EE+R+HWGGG+LG+KS ARI+KLE
Sbjct: 234 RHEEIRRHWGGGILGSKSLARISKLE 259
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +2
Query: 2 DKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 181
DKTTA LFK+LEKYRPE+ +P+ + +GTNTVTKL+
Sbjct: 93 DKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLI 152
Query: 182 EKKKAHL 202
E+KKA L
Sbjct: 153 EQKKAQL 159
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 184 EEEGALVVIAHDVDPIELVLFLPAYAVK 267
+++ LVVIAHDVDP+ELVLFLPA K
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRK 181
>BT003451-1|AAO39454.1| 739|Drosophila melanogaster RH45372p
protein.
Length = 739
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 300 TCP*QCSMVRPFYGISWQEENQLNGINI 217
T P CSMV+P + QE N L+ IN+
Sbjct: 179 TAPAACSMVQPLNCLPHQELNHLSSINL 206
>AE014134-1899|AAN10755.1| 739|Drosophila melanogaster CG31719-PC,
isoform C protein.
Length = 739
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 300 TCP*QCSMVRPFYGISWQEENQLNGINI 217
T P CSMV+P + QE N L+ IN+
Sbjct: 179 TAPAACSMVQPLNCLPHQELNHLSSINL 206
>AE014134-1898|AAF52960.2| 739|Drosophila melanogaster CG31719-PB,
isoform B protein.
Length = 739
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 300 TCP*QCSMVRPFYGISWQEENQLNGINI 217
T P CSMV+P + QE N L+ IN+
Sbjct: 179 TAPAACSMVQPLNCLPHQELNHLSSINL 206
>AE014134-1897|AAF52959.2| 739|Drosophila melanogaster CG31719-PA,
isoform A protein.
Length = 739
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 300 TCP*QCSMVRPFYGISWQEENQLNGINI 217
T P CSMV+P + QE N L+ IN+
Sbjct: 179 TAPAACSMVQPLNCLPHQELNHLSSINL 206
>BT024207-1|ABC86269.1| 706|Drosophila melanogaster RE41071p
protein.
Length = 706
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 133 EAQHHPIRHKH-SHQAGREEEGALVVIAH-DVDPIELVLFLPAYAVKWAYHTALSRASPA 306
E HH HKH SHQ E + + ++ D + + V + + T + R +
Sbjct: 462 EMNHHNHNHKHNSHQQNHESQDSNTIVTDLDGNAVYAVNKAKDKDSRNDHVTVILREHES 521
Query: 307 SVHLYTARHAH 339
S H ++ RH H
Sbjct: 522 SHHGHSHRHGH 532
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 LCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRASFSKVVEAIK 407
LC VPY V+ K LG V R C TN S ++ + + + I+
Sbjct: 71 LCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 LCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRASFSKVVEAIK 407
LC VPY V+ K LG V R C TN S ++ + + + I+
Sbjct: 71 LCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIE 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,695,724
Number of Sequences: 53049
Number of extensions: 403432
Number of successful extensions: 1707
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -