Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30659
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40943-1|AAK72061.2|  398|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AJ012357-1|CAB41352.1|  371|Caenorhabditis elegans cyclic AMP-de...    29   2.8  
AC024202-8|AAK93869.2|  816|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z81567-3|CAB04587.1|  301|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...    28   8.5  
AC006834-5|AAF40007.1|  451|Caenorhabditis elegans Hypothetical ...    28   8.5  

>U40943-1|AAK72061.2|  398|Caenorhabditis elegans Hypothetical
           protein F47F2.1b protein.
          Length = 398

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 406 NSSRCQRYTEWLCEEVHPSLDVRHLRRQADLDQAERIRRLGR 281
           N+SR       L EE H  L +   R    L Q ERI  +G+
Sbjct: 57  NNSRGNNQVNELAEETHMKLSITPTRESFSLSQLERIITIGK 98


>AJ012357-1|CAB41352.1|  371|Caenorhabditis elegans cyclic
           AMP-dependent protein kinase,catalytic subunit protein.
          Length = 371

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 406 NSSRCQRYTEWLCEEVHPSLDVRHLRRQADLDQAERIRRLGR 281
           N+SR       L EE H  L +   R    L Q ERI  +G+
Sbjct: 30  NNSRGNNQVNELAEETHMKLSITPTRESFSLSQLERIITIGK 71


>AC024202-8|AAK93869.2|  816|Caenorhabditis elegans Hypothetical
           protein Y71H2B.5 protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 409 INSSRCQRYTEWLCEEVHPSLDVRHLRRQADLDQAERIR 293
           I+    QR+   + E   P LD  HLRRQA+  Q E +R
Sbjct: 286 IDEELSQRFVSAIQES--PDLDRTHLRRQAEYSQQEFLR 322


>Z81567-3|CAB04587.1|  301|Caenorhabditis elegans Hypothetical
           protein K08C9.4 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 347 RCQAFEAPGRPGPGREDPAIGPRYRPRQD-PGGSDAVARE 231
           +C A  APG  GP  E  A GP  +P QD P G D    E
Sbjct: 136 KCPA-GAPGPAGPDGEAGAPGPDGQPGQDGPAGIDGAPGE 174


>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 272 VDISAQSPDPLGLVQVGLAPQMPDI 346
           VD+   SP P GLV+ G+AP   ++
Sbjct: 52  VDVFENSPVPFGLVRYGVAPDHQEV 76


>AC006834-5|AAF40007.1|  451|Caenorhabditis elegans Hypothetical
           protein ZK973.3 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
 Frame = -2

Query: 222 AECEVPEAAG----HALREIEANRCCQ----SRRHCYIAPCGGNGSSFGKILPAGVQYAR 67
           AE  +P A G    HA     +  CC       RH ++A  G   +  G + P G   AR
Sbjct: 169 AENALPSAKGVIDRHAAMVAASGSCCTLAHIRSRHLHVANLGDAAAVLGVVNPNGSVTAR 228

Query: 66  HDHRAH 49
              RAH
Sbjct: 229 QLSRAH 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,783,611
Number of Sequences: 27780
Number of extensions: 413345
Number of successful extensions: 1207
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)