Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30657
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0924 - 33058194-33058697,33058798-33060147,33060234-330603...    31   0.79 
04_04_1290 + 32399905-32399972,32400502-32400571,32400950-324017...    31   1.4  
08_02_0588 + 19036509-19039235                                         29   5.5  
03_05_0457 - 24506420-24506974,24507142-24508329,24509262-245093...    29   5.5  
11_06_0139 - 20531320-20531433,20532146-20532276,20533031-205333...    28   9.7  
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120...    28   9.7  

>01_06_0924 -
           33058194-33058697,33058798-33060147,33060234-33060303,
           33060918-33060976
          Length = 660

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 161 HIWV-QSERQQLCAVSNLHQFEREACT 238
           H W+ +SER+QLC + N  +   EACT
Sbjct: 495 HPWLSESEREQLCRLMNCQKLSLEACT 521


>04_04_1290 +
           32399905-32399972,32400502-32400571,32400950-32401734,
           32403068-32403674
          Length = 509

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 161 HIWVQ-SERQQLCAVSNLHQFEREACT 238
           H W+  SER+QLC + N  +   EACT
Sbjct: 321 HSWLTASEREQLCRLMNCQKLSLEACT 347


>08_02_0588 + 19036509-19039235
          Length = 908

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 146 PLNTFHIWVQSERQQLCAVSNLHQF 220
           PLNT H W  S+ ++ CAV+N   F
Sbjct: 595 PLNTLHRWPFSKGKEECAVTNSAPF 619


>03_05_0457 -
           24506420-24506974,24507142-24508329,24509262-24509331,
           24510627-24510704,24511088-24511149
          Length = 650

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 161 HIWV-QSERQQLCAVSNLHQFEREACT 238
           H W+ ++ER+QLC + +  +   EACT
Sbjct: 468 HSWLSEAEREQLCRLMDCQKLSLEACT 494


>11_06_0139 -
           20531320-20531433,20532146-20532276,20533031-20533382,
           20533384-20533527,20533726-20533875,20534197-20534204,
           20534267-20534471
          Length = 367

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/79 (25%), Positives = 34/79 (43%)
 Frame = +1

Query: 19  FIRIKIFFISYGYFRSRWRNRNYCLCSHVEYQ*VTNRGVAVKTLEHISHLGTIRKATALR 198
           ++ I     S G  R+RW +  Y   SH        R V+ ++L    ++   R A ++ 
Sbjct: 122 YVAISHTATSIGVRRARWFSNQYVAISHTATSIGVRRDVSTRSLVLEPYVAICRTANSI- 180

Query: 199 GFKLASI*TRGMHDYYQAI 255
           G +   + TR   + Y AI
Sbjct: 181 GVREMILLTRWFSNQYVAI 199


>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
            34512493-34513964,34514114-34514377,34514761-34514978,
            34515759-34516030,34516190-34516559,34516578-34516797,
            34516819-34518931,34518941-34519193,34519269-34519401,
            34520597-34521114,34521207-34522115,34522195-34522368,
            34522833-34522882,34523963-34524035,34524413-34524477,
            34524736-34525522,34525622-34525878,34525989-34526109,
            34526315-34526956
          Length = 5320

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 122  PTGVSL*RPLNTFHIWVQSERQQLCAVSNLHQFEREAC 235
            PT       L +  +W+ SE QQL     LH F    C
Sbjct: 3476 PTSTKCLTRLGSTELWIASEEQQLLMRPFLHHFIHHQC 3513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,819,732
Number of Sequences: 37544
Number of extensions: 386283
Number of successful extensions: 636
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)