BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30656
(815 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein. 25 2.8
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 24 6.4
>DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein.
Length = 434
Score = 25.0 bits (52), Expect = 2.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 756 VHRYSRLFSAHFYHYRTFVIPYSDVVRTVHGGYRPYS 646
+ R S+ F+ FY Y T ++ Y+ V T + P+S
Sbjct: 50 LQRSSQKFALQFYQYVTELVDYNPNVTTTNIIVSPFS 86
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 569 VLKTAPSEYGTQAPTGSSLP*TMVSKEYGRYPPCTVRTT 685
++ +PS Y T+AP L + K PP VR T
Sbjct: 480 IIFQSPSLYDTRAPVDQQLSEIPLRKNNFMLPPDIVRIT 518
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 923,273
Number of Sequences: 2352
Number of extensions: 21243
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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