Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30654
         (322 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...    66   5e-12
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...    58   2e-09
Z68105-5|CAA92123.2|  729|Caenorhabditis elegans Hypothetical pr...    27   3.0  
AL009066-1|CAA15625.2|  729|Caenorhabditis elegans Hypothetical ...    27   3.0  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score = 66.1 bits (154), Expect = 5e-12
 Identities = 24/63 (38%), Positives = 42/63 (66%)
 Frame = +1

Query: 4   WFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGKLIFLSTPGDHLRFTEEWMIKNII 183
           WFGFY  G  + ++ + E+ +Y +DR+GLKK+ ++G++ F+   GDHL+     ++ +II
Sbjct: 206 WFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIHFMDVDGDHLQIPRSVLVNDII 265

Query: 184 KPY 192
           K Y
Sbjct: 266 KKY 268


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score = 57.6 bits (133), Expect = 2e-09
 Identities = 20/49 (40%), Positives = 35/49 (71%)
 Frame = +1

Query: 4   WFGFYAPGQAEKLVSLRESKIYLQDRLGLKKMDKAGKLIFLSTPGDHLR 150
           WFGFY  G  + ++ + E+ +Y +DR+GLKK+ ++G++ F+   GDHL+
Sbjct: 206 WFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIHFMDVDGDHLQ 254


>Z68105-5|CAA92123.2|  729|Caenorhabditis elegans Hypothetical
           protein F13E6.2 protein.
          Length = 729

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 55  ESKIYLQDRLGLKKMDKAGKLIFLSTPGDHLRFTEEWMIK 174
           E++IYLQD    +  +     +  S P D L+F EE ++K
Sbjct: 6   EARIYLQDHRIPQLFEGLMTGLIYSRPADPLKFLEESIVK 45


>AL009066-1|CAA15625.2|  729|Caenorhabditis elegans Hypothetical
           protein F13E6.2 protein.
          Length = 729

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 55  ESKIYLQDRLGLKKMDKAGKLIFLSTPGDHLRFTEEWMIK 174
           E++IYLQD    +  +     +  S P D L+F EE ++K
Sbjct: 6   EARIYLQDHRIPQLFEGLMTGLIYSRPADPLKFLEESIVK 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,343,671
Number of Sequences: 27780
Number of extensions: 109204
Number of successful extensions: 176
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)