Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30653
         (346 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58776-1|AAC47266.1|  456|Drosophila melanogaster glutamate-gate...    29   2.1  
DQ665648-1|ABG57261.1|  453|Drosophila melanogaster glutamate-ga...    29   2.1  
BT028797-1|ABI34178.1|  263|Drosophila melanogaster IP16167p pro...    29   2.1  
AJ002232-1|CAA05260.1|  454|Drosophila melanogaster DrosGluCl pr...    29   2.1  
AF297501-1|AAG40736.1|  336|Drosophila melanogaster glutamate-ga...    29   2.1  
AF297500-1|AAG40735.1|  456|Drosophila melanogaster glutamate-ga...    29   2.1  
AE014297-2702|AAX52967.1|  455|Drosophila melanogaster CG7535-PC...    29   2.1  
AE014297-2701|ABC66182.1|  454|Drosophila melanogaster CG7535-PD...    29   2.1  
AE014297-2700|AAN13808.1|  454|Drosophila melanogaster CG7535-PB...    29   2.1  

>U58776-1|AAC47266.1|  456|Drosophila melanogaster glutamate-gated
           chloride channel protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQI--YIPCCMLVIVS 262


>DQ665648-1|ABG57261.1|  453|Drosophila melanogaster glutamate-gated
           chloride channel protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQI--YIPCCMLVIVS 262


>BT028797-1|ABI34178.1|  263|Drosophila melanogaster IP16167p
           protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 135 TLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI--YIPCCMLVIVS 184


>AJ002232-1|CAA05260.1|  454|Drosophila melanogaster DrosGluCl
           protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQI--YIPCCMLVIVS 262


>AF297501-1|AAG40736.1|  336|Drosophila melanogaster glutamate-gated
           chloride channel protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI--YIPCCMLVIVS 262


>AF297500-1|AAG40735.1|  456|Drosophila melanogaster glutamate-gated
           chloride channel protein.
          Length = 456

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQI--YIPCCMLVIVS 262


>AE014297-2702|AAX52967.1|  455|Drosophila melanogaster CG7535-PC,
           isoform C protein.
          Length = 455

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 214 TLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI--YIPCCMLVIVS 263


>AE014297-2701|ABC66182.1|  454|Drosophila melanogaster CG7535-PD,
           isoform D protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI--YIPCCMLVIVS 262


>AE014297-2700|AAN13808.1|  454|Drosophila melanogaster CG7535-PB,
           isoform B protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +1

Query: 109 TVEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFIS 264
           T+EK + +      N+  Y C+K+   F     Y+L +I  ++  C+ V +S
Sbjct: 213 TLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI--YIPCCMLVIVS 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,209,760
Number of Sequences: 53049
Number of extensions: 202197
Number of successful extensions: 273
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)